Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2033 ATGAATTGTTCTTCTCTTCATTTTTTTGCAGGCATCATGATGTTTAGTTTTCTATTTCTAGCTCTTTTGGCGACAAATTCAATGGCTATCACGGTGCAGCAAACATATATAGTACACATGGATAAAACCAAAATTGAAGCCTCAGTTCATTCTCAAGACAGCACAAAACCATGGTCTGAATCAATCATTGATTTCATTTCTCAAGCTTCAATGGAAGAAGAACAAGAAGAAGAGATTTTATCACCTCAGCTTTTATATGCCTATGAAACAAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAACTTAAACACTTAAGCCAAGTTGATGGTTTCCTTTCAGCCATACCTGATGAACTTTTAACCCTCCACACAACATACACACCACATTTTCTTGGCCTAACAAATGGAAAAGGACTCTTGAGTGCTCCAAATTTGGCCTCTGATGTTATCATTGGTGTCCTTGATTCCGGAATATGGCCGGAACACATCAGTTTCAAAGACTCTAGCTTTTCTCCAATACCTCCTAAATGGAAAGGTATTTGTGAAAATGGCACCAAATTCTCATCCTCGAACTGTAACAAGAAACTCATCGGTGCAAGATACTATTTCAGAGGGTACGAAAAATTCATCGGAAAAATCAACGAAACAACTGATTATCGTTCCGCTAGAGACTCTCAAGGTCATGGAACACACACTGCCTCGACTGCAGCCGGTAATGTGGTTCAAAAAGCAAGCATTTTTGGACTTGCTAAAGGTTCAGCAAGTGGAATGAGGTATACTTCAAGAATTGCGGCGTATAAAGTGTGTTGGCTTTCTGGCTGTGCAAATTCGGACGTATTAGCAGCAATGGACCAAGCAGTTTCTGATGGTGTTGATGTACTTTCACTCTCTTTAGGAAGTATTCCAAAACCATTTTATAATGATAGTATTGCTATAGCTTCATTTGGAGCAACAAAAAACGGCGTTTTTGTTTCTTGCTCCGCAGGCAACTCTGGCCCTTTTGCATCAACAGTTGGAAACGGCTCGCCATGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACAAAAGTCAAACTCGGAAACTCAAAAACTTTTGAAGGCACATCTTTGTACCAAGGAAAAAATCAAACAAACCAACAATTTCAACTTGTGTATGGAAAAACAGCAGGTAAAAAGCGAGAAGCAGTGTTTTGCACAAAAAACTCACTTGATAAAAAACTTGTTTTCCGAAAAATAGTTGTTTGTGAAAGAGGAATCAACAGCAGAACAGAAAAAGGAGAAGAAGTTAAAAAATCAGGTGGATATGGAATGATACTACTTAACTCGGAAAATCAAGGTGAAGAGCTTCTTTCTGATGCTCATGTTTTACCAGCTACTTCATTAGGTGCTTCAGCAGGTAAAATCATCAGAAGCTACATTAACACTGTTAAAAAACCAACAGCTTCAATTTCATTTCTAGGAACAAGATACGGTAATGTTGCGCCAATTATGGCAGCATTTTCATCTAGAGGACCAAATATAATAGGACAAGATGTTATCAAACCAGATATAACAGCACCTGGTGTTAACATCTTAGCTGCATGGCCATCAAACACTAGTCCAACTATGATCAAAAGTGACAAAAGAAGAGTCCTCTTTAACATTGTTTCAGGTACATCAATGTCTTGTCCTCATGTTAGCGGCATAGCCGCGTTGATTAAATCTGTTCATAAAGATTGGTCACCTGCAATGATCAAATCATCTCTTATGACAACAGCTTACACATTGAACAATAAAAACCTTCCGATTTCAGATCTTGCTTCGAATAACTCGGCTTCAGCTAACCCTTTTGCATTTGGTTCAGGACATGTTAATCCAGAAAGTGCTTCTGATCCTGGATTAGTCTATGATATTAACACTAATGACTATTTGAATTACTTTTGCAGCCTTAACTTTACTTCATCAGAGATTACTATATTGACAAAAACCAACTTCAAATGTTCAAAGAAACCACTTTTTCAAGTTGGTGACTTGAATTATCCTTCATTTGCTGTTTTGTTTAGTAGAACAGTACATAATGTGACATACAAAAGAGTTGTTACAAATGTTGGGAAATCAAAAAGTGCTTATTATGATGTTAAAGTTGAACAACCTAATGGAGTTATTGTTAGTGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTAAGCTATAAAGTTACATTTTTAGCAGTTGGAAAAACAAGAGTTATTGGTACTTCATCATTTGGATCACTCATTTGGGTATCTGGAAAATATAAGGTTAGAAGTCCTATTGCAGTGACATGGCAATAG 2340 0.3718 MNCSSLHFFAGIMMFSFLFLALLATNSMAITVQQTYIVHMDKTKIEASVHSQDSTKPWSESIIDFISQASMEEEQEEEILSPQLLYAYETNMFGFAATLSEKQLKHLSQVDGFLSAIPDELLTLHTTYTPHFLGLTNGKGLLSAPNLASDVIIGVLDSGIWPEHISFKDSSFSPIPPKWKGICENGTKFSSSNCNKKLIGARYYFRGYEKFIGKINETTDYRSARDSQGHGTHTASTAAGNVVQKASIFGLAKGSASGMRYTSRIAAYKVCWLSGCANSDVLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGSPWIMTVAASYIDRTFPTKVKLGNSKTFEGTSLYQGKNQTNQQFQLVYGKTAGKKREAVFCTKNSLDKKLVFRKIVVCERGINSRTEKGEEVKKSGGYGMILLNSENQGEELLSDAHVLPATSLGASAGKIIRSYINTVKKPTASISFLGTRYGNVAPIMAAFSSRGPNIIGQDVIKPDITAPGVNILAAWPSNTSPTMIKSDKRRVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNSASANPFAFGSGHVNPESASDPGLVYDINTNDYLNYFCSLNFTSSEITILTKTNFKCSKKPLFQVGDLNYPSFAVLFSRTVHNVTYKRVVTNVGKSKSAYYDVKVEQPNGVIVSVEPRKLKFEKLGQKLSYKVTFLAVGKTRVIGTSSFGSLIWVSGKYKVRSPIAVTWQ* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2033 779 Gene3D - 356 496 - -
Tpr6g2033 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Tpr6g2033 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 125 IPR037045 -
Tpr6g2033 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 779 IPR045051 -
Tpr6g2033 779 SUPERFAMILY Subtilisin-like 124 633 IPR036852 GO:0004252|GO:0006508
Tpr6g2033 779 Gene3D Peptidase S8/S53 domain 150 642 IPR036852 GO:0004252|GO:0006508
Tpr6g2033 779 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Tpr6g2033 779 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Tpr6g2033 779 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Tpr6g2033 779 Pfam PA domain 389 474 IPR003137 -
Tpr6g2033 779 Gene3D - 646 778 - -
Tpr6g2033 779 CDD Peptidases_S8_3 122 593 IPR034197 -
Tpr6g2033 779 Pfam Peptidase inhibitor I9 35 125 IPR010259 -
Tpr6g2033 779 Pfam Fibronectin type-III domain 676 776 IPR041469 -
Tpr6g2033 779 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 25 779 - -
Tpr6g2033 779 Pfam Subtilase family 149 603 IPR000209 GO:0006508|GO:0008236
Tpr6g2033 779 ProSiteProfiles Serine proteases, subtilase domain profile. 130 629 - -
Tpr6g2033 779 CDD PA_subtilisin_like 363 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2033 Tpr-Chr6 21951048 21953519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2033 33 779 Subtilisin-like Serine Gene Family AT1G01900 55.659 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2033 - - gmx:100790006 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2033 6 21951048 21953519 Tpr6g2033 6 21951048 21953519 ECH