Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2031 ATGGATAATAACTATGGTTCATCATCTTCACCATATCGGTATCCAAACCCTTATATGTATCCCCCTAACCCTCACCCTAACCCTAACCCTAATCCTCATCGACCGTATCCGCCTCAAGATCCATATGCACATTCTCAAGCTCCTCCTTATCCATATCCTTATCTTTCTTCACATTCCTTCAACTATTCCTATCCTAGACCATACCCTCCTCATCCTCAATTAGTACCCTCAGCCCCACCCTCTTATCCTTATCCATACCATGTTCCTCAAGGAACTCATAATCCTACTCAACCTTCTCATTCACACCATGCTAGCTTATTACAACATGGATCATCCTCTAATCATTATTATTATTATCAACAAAATGCTTCTCATGAAGACCGTCCCGATGCTCATTCGCGTCATAATAGCTACTCTGGTCCTTACTGGTCAGAGACATCAAGTTCAATAGGCGGTGGTGGTGATGGTGGTGGAGTATCACAAACTAGTGGCGGTGGTGGTGATAATTCAAGGCCATCTGTTTATCCACGTTTGGAGGATCTAATGAACGATGTTAGGTTGTCTGATAATCAGCCAGCTTCACCTTCGGCGCCAGCTCAACCTTTTATGCATTCGATTTCGGTACCGAAGATCCAACAGAAGAAGGAGGATTTTTATGGATATTCTAATAACTCGTTCTCGGGTTGGGGATCCTCGTACCCGAATCGGGTTAACTCGGGTAGATTTTCGGATTTTTCTGGTTCTGGCTCGTTTAATGACTCCATGTATAATCAGAGCTTGCAGGTTGTTCCGGTGCAGAATAAAGGGTCGTTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCGAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTAATAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGCATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCCGTAATTGGGAGGACTTTTGTAATTAGCAACTCTGAAAATCCTGTTTGGAGTCAACATTTTTATGTTCCTGTTGCACATAACGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATATTGTGGGTTCACAGCTCATTGGTATTGTAGCGATTCCAGTGGAACAAATATACTCAGGGGAAATAGTTGAAGGAGCTTACCCTGTCCTGAATAGTAATGGGAAACCTTGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGAAACTAAGCTTTTATCACCAAGGAGTTGGAGCAGGGCCGGAATATATCGGAGTTCCTGCCACTTATTTTCCTTTAAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGAATCCTCCCTAATGTGGTTCTTGATAGTGGGATGTTTTATGTGAATGGAAAATGTTGGCATGACATCTTTGATGCCATAAGTCAAGCTCGCCGCTTGATTTATATTACAGGTTGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGAGATGGCGGTTATGCATCAGATTATACCTTGGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCAACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTAATGGCAACTCATGATGAGGAAACTAGACGGTTTTTCAAGCACTCATCAGTCCATGTACTGCTTTGTCCCCGCATTGCTGGAAAACGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATACACACATCATCAGAAAACTGTAATTGTGGATGCGGATGCCGGAAATAACAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTATGTGATGGGCGATATGATACTCCCCACCACCCTATCTTTAAGACATTACAGACAATACATAAGGATGATTATCACAACCCCACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTCTTAACTAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACCGCATGGGATAAAGAAGTTGAAAATTTCATATGATGACGCTTTACTTAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGAAAATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGAACCAAAAGGTGCTGCCACGCAAAGGATTCTCTTCTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGCCTTGGTAATCGGGAGGCTATAAATCTTTATGAAAATGTCAATGTGTCAGGAAATCCTCCCCAAGCAAATAGTCCACAAGCAAATTGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAGTGGGATCCGCAAACATTAACCAAAGGTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAAACGTCTTGTCCACATGGACAGATCCATGGATATAGAATGTCACTTTGGGCAGAACATACTGGAACAATTGAAGAAAGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAGGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGCAAATGAAGTAACAGAGATGAGAGGGCATCTACTAAAATACCCTGTAGATGTAGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCAGGAAGAGTTCCCTGATGTAGGAGGAAAAATTGTCGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTAA 3276 0.4112 MDNNYGSSSSPYRYPNPYMYPPNPHPNPNPNPHRPYPPQDPYAHSQAPPYPYPYLSSHSFNYSYPRPYPPHPQLVPSAPPSYPYPYHVPQGTHNPTQPSHSHHASLLQHGSSSNHYYYYQQNASHEDRPDAHSRHNSYSGPYWSETSSSIGGGGDGGGVSQTSGGGGDNSRPSVYPRLEDLMNDVRLSDNQPASPSAPAQPFMHSISVPKIQQKKEDFYGYSNNSFSGWGSSYPNRVNSGRFSDFSGSGSFNDSMYNQSLQVVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFNKLPGSVSNKIEGTMHKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFVVKDSDIVGSQLIGIVAIPVEQIYSGEIVEGAYPVLNSNGKPCKQGAVLSLSIQYIPMEKLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGILPNVVLDSGMFYVNGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDGGYASDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPIFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGENDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGEPKGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINLYENVNVSGNPPQANSPQANCRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKTSCPHGQIHGYRMSLWAEHTGTIEESFLQPESLECVRRVRAIGEMNWKQFAANEVTEMRGHLLKYPVDVDRKGKVRSLPGQEEFPDVGGKIVGSFLAMKENLTI* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2031 1091 PANTHER PHOSPHOLIPASE D ALPHA 1 174 1091 - -
Tpr6g2031 1091 SMART C2_3c 279 401 IPR000008 -
Tpr6g2031 1091 Pfam Phospholipase D Active site motif 938 964 IPR001736 GO:0003824
Tpr6g2031 1091 Pfam Phospholipase D Active site motif 604 638 IPR001736 GO:0003824
Tpr6g2031 1091 CDD C2_plant_PLD 273 425 - -
Tpr6g2031 1091 SUPERFAMILY Phospholipase D/nuclease 783 1023 - -
Tpr6g2031 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 603 638 IPR001736 GO:0003824
Tpr6g2031 1091 Gene3D C2 domain 273 414 IPR035892 -
Tpr6g2031 1091 MobiDBLite consensus disorder prediction 146 169 - -
Tpr6g2031 1091 MobiDBLite consensus disorder prediction 1 50 - -
Tpr6g2031 1091 MobiDBLite consensus disorder prediction 15 48 - -
Tpr6g2031 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 937 964 IPR001736 GO:0003824
Tpr6g2031 1091 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 276 426 IPR035892 -
Tpr6g2031 1091 Pfam Phospholipase D C terminal 1011 1081 IPR024632 -
Tpr6g2031 1091 SUPERFAMILY Phospholipase D/nuclease 449 703 - -
Tpr6g2031 1091 Gene3D Endonuclease Chain A 483 717 - -
Tpr6g2031 1091 Pfam C2 domain 278 404 IPR000008 -
Tpr6g2031 1091 SMART pld_4 603 638 IPR001736 GO:0003824
Tpr6g2031 1091 SMART pld_4 937 964 IPR001736 GO:0003824
Tpr6g2031 1091 MobiDBLite consensus disorder prediction 146 170 - -
Tpr6g2031 1091 PANTHER PHOSPHOLIPASE D 174 1091 IPR015679 -
Tpr6g2031 1091 Gene3D Endonuclease Chain A 749 986 - -
Tpr6g2031 1091 ProSiteProfiles C2 domain profile. 256 402 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2031 Tpr-Chr6 21935510 21942964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2031 162 1091 Phospholipase D Gene Family (Wang group) AT2G42010 73.306 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2031 K01115 - gmx:100801286 1795.02