Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2027 ATGCCATATTTTTCTAATTTGCAGGCATTGCTTCATGTTATATATTGGGACTCACTGCCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAACTACCTTGATGGCTCAGCATCTGCTAGCAACAGCTGATCGGTATGGCTTAGATAGACTTAGGCTGATGTGTGAAGCAAGTTTATGTGAAGATGTTGCAATAAACACTGTGGCTACAACTTTAGCTTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAAGCAGTCTGTCTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTATTTGAAGGAAAGTTGTCCATCTGTTTTGACTGATCTTTTGGAGTATGTGGCCAGATTTACTGAGCATTCAGACTTCCTGTGCAAGCATAGGAACGAAGCAATACTTGATGGCAGCGATGTAAATGGAAGGCGGGTGAAACAAAGAATATACTGTGAAAAATGA 492 0.4187 MPYFSNLQALLHVIYWDSLPDMQELTGINSKWATTLMAQHLLATADRYGLDRLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTDLLEYVARFTEHSDFLCKHRNEAILDGSDVNGRRVKQRIYCEK* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2027 163 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 7 140 - -
Tpr6g2027 163 CDD BACK_AtBPM-like 62 125 IPR034090 -
Tpr6g2027 163 Gene3D Potassium Channel Kv1.1; Chain A 3 59 IPR011333 -
Tpr6g2027 163 SUPERFAMILY POZ domain 7 64 IPR011333 -
Tpr6g2027 163 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 7 140 IPR045005 GO:0016567
Tpr6g2027 163 Pfam BTB/POZ domain 5 63 IPR000210 GO:0005515
Tpr6g2027 163 Gene3D - 65 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2027 Tpr-Chr6 21905441 21909668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr6g2027 BTB 0.00013 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2027 K10523 - gmx:100799666 297.36