Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2004 ATGAATATGGATTTAGGTTGTAGTTTGCCACAGTCAAGAATTTTACACGGAGCCGTGGAGACTAGTTATAGACAAAAATATGTAGGTCAAGTAGGTTTTCTTGACTATAGGAGAGGTTTTGGTTGTGGATTTTTAGGCAAAAGTGTTTTGAGATCACGTTTTAGTGTGGAGAACAAAGTTAGTTGTGTTTCTTCTTGTTGGAATGATTCAAAAGTGGTTGCTGGTGGTGAGTTTAAAGTTTTGAACACAAAGAGAAGTATGTCATGTAAGAATGAGAAACTTCTTATGGGATCCAGATTCATTTGGTTGAAATGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGCAATGGCCGCAATGTTGATTATGTGGAAGGTTCGGGTGAGGATGCAGCAGTGGTACCTATATCTAGTGTTGAATTGGATGTTCCAGTGGAAGAAGGAGGGAGGGCTGAGAAGGAAATAGGAGTAGAGGAACAAAGTGTGGATGAATTGAAAGAACTATTGCAAAAGGCCTTGAAAGAGCTAGAAGTTGCGCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATCTTTTTGCATGATGAAGCAGCCCGATCTTTGAATGATGTTAATTCTACCCTTGACACCATTCAAAAAGTTGCAAATGAAGAACATCAGGCCAAAGAGGCTGTCCAAAATGCTACAATGGCTCTTTCATTAGCCGAGGCAAGACTCCAGGTAGTCATAGAGTCTTTAGAGGCAGCAAAAGAAGTACATGAAGGTTCTAATGAGAGTGATGGCGGTAAGGACTTAACAGAAAAGCAGAGCACACTTTTTGTTGCACAAGAAGATATAAAGGAATGCCAGGAAACTTTGGCAAATTGTGAGGTAGAATTGAGGCGCTTGCAAAATAAAAAGGAAGAGTTGCAAAACGAAGCTAGCAAATTGCAAGAAATTGCTGAAAAGGCACAGCTGGATGCAGTGAAAGCTGAGGAGAATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCATTTGAACTTGAGGCTACACAACGTGTGAATGATGCTGAGATTGCTTTACAGAGAGCTAATAAGTCTTTTACAAATTTGAATGCTGACACTGTAGAAACTATACAAGTACAAGATGTCGTGCTTGTTTCTGAGGAGGAGAACAATGTAGAAAGTTTTTCTGATGATGTCACAGTTAGTAGAGACAAAGATTTGGCCACAATTGATGATGCATCTTTGCTTGCCAAGTTATCACCTGAAACAGAATCTGAAAAAGCCATCCAAATTTCAGAAGACACAGCGCAGCCTGATTATATAAGTGATAGTGAGAATGCCATCCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAAGGATAGTTCACCATTTGCTCCCAAAGCATTATCGAAAAAGTCATCTCGATTCTTTTCTGCATCGTTCTTTTCTTTTACCGAAGAGGAGGCTGAGTCCACACCAGCATCAGTTTTCCAAGGCCTCATATTATCTGCAAAGAAGCAGTTGCCCAAGCTAGTTCTTGGGTTATTGTTAATGGGAGCAGGAGCTGCTGTCTATGCCAATAGGGCTGAGAAAAATGCTCAGTTCCTTCAACAGCCAGATGTTATTGTGACCAGTGCTGAAGAATTTTCTTCTAATGCAAAGCCTCTATTTAGAAAACTCCAGAAAATCCCCAAGAAAATTAAGAAAATCATTGCGTCGTTACCTCATCAGGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGTAGTCCTGTTCTTGGTTACTTGGCTGCTGGCATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCATGTTCATGCGACTAAAGCAATAGCTGAGTTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTCAGTTCTATGAAGAAATATGTTTTTGGATTAGGTTCTGCGCAGGTTTTAGCAACTGCTGCAGTTGTTGGCTTGGTGGCTCATTATATCTGTGGCCTACCTGGCCCTGCTGCTATAGTCATCGGGAATGGCCTGGCTTTATCATCCACTGCCGTTGTTCTGCAGGTGTTGCAAGAAAGAGGCGAGAGCACATCACGGCATGGGCGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTAGTCTTGCTAATACTCATACCTCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCAGCTGTTAAGGCAGCAGTCGCCATTACTGCCATAATTGCAGGTGGACGATTGCTTCTTCGGCCAATATACAAGCAAGTTGCTGAAAATCAAAATGCCGAAATCTTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTCTTACCGCCAGGGCAGGACTTTCAATGGCACTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTGCAGGTTGAATCTGATATTGCACCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCATGGGGACACTGACACTCTTAATATGCGGAAAGACTATCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTCATTTCAGCTTTAAGAGCTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCTCAGCTATCTTCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTAGCTGCAGGAGGCCAGTTTATTGCTTCCCGTTTCGAGCAGCATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCATTTGTTGCACTAGATGTGAGAAGTGAAAGAGTGGCTGTTGGGCGAGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTCGAGAGGTCCTACATAAGGTCGGGGCTGAAAGGGCATGTGCTGCAGCTATAACACTAGATACTCCTGGAGCAAATTATAGAACAGTTTGGGCTCTTAGCAAGTACTTCCCTAACGTTAAGACGTTTGTCCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCCGGAGCTACTGCGGTGGTACCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCCGCTGTACTTGCTCAGGCTAAACTCCCCGCATCAGAGATTTCAGCGACAATAAATGAATTCAGATGCCGACATCTAGCTGAGCTTACAGAGTTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATATACTAGAATTATGAGCAAATCCAAATCTCAATCCCCAGATACATTAGATTTAGATGAGACCCAAGTCTCTGAAAGTACACTGGCAGTATGA 3597 0.4206 MNMDLGCSLPQSRILHGAVETSYRQKYVGQVGFLDYRRGFGCGFLGKSVLRSRFSVENKVSCVSSCWNDSKVVAGGEFKVLNTKRSMSCKNEKLLMGSRFIWLKCQGNDSLAYVNGNGRNVDYVEGSGEDAAVVPISSVELDVPVEEGGRAEKEIGVEEQSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSLNDVNSTLDTIQKVANEEHQAKEAVQNATMALSLAEARLQVVIESLEAAKEVHEGSNESDGGKDLTEKQSTLFVAQEDIKECQETLANCEVELRRLQNKKEELQNEASKLQEIAEKAQLDAVKAEENVTNIMLLAEQAVAFELEATQRVNDAEIALQRANKSFTNLNADTVETIQVQDVVLVSEEENNVESFSDDVTVSRDKDLATIDDASLLAKLSPETESEKAIQISEDTAQPDYISDSENAIQTKKQETQKDLTKDSSPFAPKALSKKSSRFFSASFFSFTEEEAESTPASVFQGLILSAKKQLPKLVLGLLLMGAGAAVYANRAEKNAQFLQQPDVIVTSAEEFSSNAKPLFRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAAVVGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVMGTLTLLICGKTILVSLMGRIFGISLISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQFIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEISATINEFRCRHLAELTELCEASGSSLGYGYTRIMSKSKSQSPDTLDLDETQVSESTLAV* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2004 1198 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3 1198 - -
Tpr6g2004 1198 Pfam Sodium/hydrogen exchanger family 598 968 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr6g2004 1198 ProSiteProfiles RCK N-terminal domain profile. 1000 1122 IPR003148 GO:0006813
Tpr6g2004 1198 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 997 1136 IPR036291 -
Tpr6g2004 1198 Gene3D - 996 1160 - -
Tpr6g2004 1198 Coils Coil 155 182 - -
Tpr6g2004 1198 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 599 879 IPR004771 GO:0006812|GO:0008324|GO:0016021
Tpr6g2004 1198 Coils Coil 286 334 - -
Tpr6g2004 1198 Gene3D - 588 973 IPR038770 -
Tpr6g2004 1198 Pfam TrkA-N domain 1001 1114 IPR003148 GO:0006813
Tpr6g2004 1198 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 1198 - -
Tpr6g2004 1198 MobiDBLite consensus disorder prediction 1178 1198 - -
Tpr6g2004 1198 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2004 Tpr-Chr6 21705712 21723413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2004 87 1198 Inorganic Solute Cotransporters AT4G00630 69.442 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2004 - - gmx:100798822 1735.7