Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1995 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGAGTGAGGATGATGAAGAAGAAATGGGAATGGGTATGAAAGGCGGGGATGACGAGGATGAAGATTATGAGGAAAATGGAGGTGTGCTTGGAAATGTTTCAAGGATGGTAGAGATTGATGGTGGGAGTGGGATGGGAACTGGAGCTGATGGTGACAGTAGGTTTCAGCAGCACCACTTGTTTCAAGAGCAAGTAGGCTCTCCGGGTGGAGGCACTCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGAAATTATAATCTTAGAGTTAGGGCTGACATTAATGATGTCATTGCTGCTCTTGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGAACTACATTTCCCTCAAGATCTCAGGGTCAGATGCCTGCTGGTGGCAATTCTGCAGTTGTTACTTCGTCATCATCCCATGTGCCTTCCCAACAGCCACCATCTGTTTCCCTCAAGGGGGTTGCTTCTGACTATGGCAGCCCTTTAGAGTATAATGCATGTCCAATGAAAGGTGTTTTCGTACCAGCTCCATCTCCATCTCCTTATGATCTATCCTCAAGTTCCCAGTCTCAAACATCTATGGTGGGGGATGGTGAAGCTCAGAGAGACAATCCTCCTGTGGTTGGTGGTTCAATAGATACCATTAATGAGAAGCAGATTGTTGACATTCCACCCAGATTATCAGAACGTGATTTTGCTGGGACCCCATATGTTCCTGTTTATGTGATGCTGCCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAAGGTGTTAAAATCAGCAAATGTTGACGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCATGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACAGATAGAGAGGGAAGACACAACCCTGAATGTCTCTCTTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTGACGAGTATTTTGAGGATGGCTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCTTCTCCTGTAAAGCATGGCTGGAGATATCCTGGTGTTGGTGAATTCCAGTGCTATGATCGGTATATGTTGAAAAATCTTAGGAAAGCAGCAGAAGCAAGAGGGCACACTATTTGGGCAAGAGGGCCAGATAATGTGGGCACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGTAGGTTTTTTCTCAATTGGTACTCTCAGGCTTTAGTTGATCATGGAAACCGAGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCCTGCATTGCTGCAAAGCTATCAGGTATTTACTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAATCCATGCAATCGTGATGGCTATGCTGCAATTGTTGCAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCTGCACACATTGAATCAACATGAGGGTTTTCCGGAGCCATTTGCTGATCCTGAGCGATTAGTTTGGCAAGTGTTGAATGCCGGTTGGGATGTTGGACTTCCCGTTGTCAGTGAGAATTCACTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTTTTGGATAATACCAAGCCCATGAATGATCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTCCACTTCTGATGGAACGTCAAAACTTCATAGAGTTTGAACGTTTTGTCAAGAGAATGCATGGAGAAGCTGTTCTTGATCTTCAGGTATAA 2121 0.4446 MATDMQRLVGMSEDDEEEMGMGMKGGDDEDEDYEENGGVLGNVSRMVEIDGGSGMGTGADGDSRFQQHHLFQEQVGSPGGGTRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQMPAGGNSAVVTSSSSHVPSQQPPSVSLKGVASDYGSPLEYNACPMKGVFVPAPSPSPYDLSSSSQSQTSMVGDGEAQRDNPPVVGGSIDTINEKQIVDIPPRLSERDFAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSANVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRIEFDEYFEDGFISMIEVGLGPCGELRYPSSPVKHGWRYPGVGEFQCYDRYMLKNLRKAAEARGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQALVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIVAMLKRNGVSLNIACVDLHTLNQHEGFPEPFADPERLVWQVLNAGWDVGLPVVSENSLPCLNRVSYNKVLDNTKPMNDPDGRHFSSFTYLRLSPLLMERQNFIEFERFVKRMHGEAVLDLQV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1995 706 PANTHER BETA-AMYLASE 78 706 - -
Tpr6g1995 706 Gene3D Glycosidases 260 705 - -
Tpr6g1995 706 SUPERFAMILY (Trans)glycosidases 263 702 IPR017853 -
Tpr6g1995 706 MobiDBLite consensus disorder prediction 151 179 - -
Tpr6g1995 706 PRINTS Plant beta-amylase signature 429 438 IPR001371 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Plant beta-amylase signature 672 686 IPR001371 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Plant beta-amylase signature 687 701 IPR001371 GO:0000272|GO:0016161
Tpr6g1995 706 MobiDBLite consensus disorder prediction 84 98 - -
Tpr6g1995 706 PANTHER - 78 706 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 MobiDBLite consensus disorder prediction 211 232 - -
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 303 317 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 324 342 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 346 367 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 439 461 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 512 531 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 546 562 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 563 574 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 581 604 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 621 643 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 MobiDBLite consensus disorder prediction 211 229 - -
Tpr6g1995 706 MobiDBLite consensus disorder prediction 1 32 - -
Tpr6g1995 706 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 217 IPR008540 -
Tpr6g1995 706 Pfam Glycosyl hydrolase family 14 272 691 IPR001554 GO:0000272|GO:0016161
Tpr6g1995 706 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1995 Tpr-Chr6 21635748 21642772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1995 1 703 Glycoside Hydrolase AT2G45880 65.205 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tpr6g1995 Glyco_hydro_14 1.9e-102 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1995 K01177 - gmx:100805560 1159.44