Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1990 ATGACAAAGAGGTCTCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGCCATGCTCGCTTTACTCGGAAGTTGATTGCTGATAAGAGGCACAACAACAAGCATGCTCTTGGTGCTGTACTTACCAAGAACAAATTTGAGGCATTGAGCAATTTGGATGAAGAATATCAAGGCAATATGGACAGAGGAGAGAGTAAGAGACTAACGGTGACTACCGATGCTGACAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGACCAGGATGAAATAAAGGATCAAGGTAATGTTGTTGAATCGACACGAACCGAATTAGGGTCTGAAGATTCGCTGAAGACAGATTCCAAAAGAAAAAGAAAATCACGAAAGAAAAGCCGAGATATGGACAGCAATGATTTGAGTGCAACTTTGAAATCTGAAGTCACACATAATCAGCATTCAAATCAACAATCAAGAGATAATATAGATTTGGACAAGATTATGGAAGATTTTTGTCAAATTGAACGTGCTTGTTCCTTGATGCATGATGACGATGATAGCAAAGTTCTTGCTCAATCAAACCAAAAGAATATCAATTCTGAAGAACTTGCAAGAGATGCAATTCATGATTTTGTGAATCAGATGATATTGAATGGGAAAGATATGGTAGAAGATAAAAAATTCCTTTGCTCTCACGAACTCATGGAAACACTTCAGGTTATAAGCTCGGATAAGGAATTGTTTCTAAAACTTCTACAAGATCCAAATTCCCACTTACTGCGATATATTCAGGAGTTGGAAAATGCTCAAGGGAGAAGTGAAAAAGAATACAATTCTGTTGCTGATTCCAACTTCTCCGAACAAGACCTTGGCAATCTAAAACAAACTCGAGATATTGTCAACCGCAAGCATCATAAATTTTTCTGGAAAAAGGTAAAGTCTCAATCAAAAGTTCCAACAAATAAAAATGTGAAAACTGAGGTTCCAAATAGAATTGTCATTCTGAAACCTGCACCAACAAAAATGCAAAATTCAGAAAGTGAAAACAATGTTGTTTCGTCGCTTGATTCTCGTGATATTGTCCATTACAAAGATCCTTCTGTGAGAGTTGGTTCACCTTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGCATGGAAACCACAAACTCCCTGCTGAACGTCAAAACAATGACTCGAGAGGCAAAGCCATTTGTAAAGATAAAACTGGAATGAAATCTCCTAATAAGGATCATTTTTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTGTAAAAGGAACCAAGACTGGTATAAATGAAAGTGGTTCTTCGAAGGAAAAAGTTTCGAACTTATACATCGAGGCTAAGAAACATTTATCTGAGATGCTGGTAGATAATGGAGATGATAACACAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGAGCATAATTTTTTGACTACACATGCAAGATTATCCACTTCAGATAAAACTTGGGAGGTTAATGAGGATAGCTTGTCTCCCAAGCAAGACACCTATATTGAACAACCCTATCAGGAAACAAACAATTCAAGGAACCAATCAAGCGTTTGTGACAAAAGATCTAATGAAGTACCAGAAATTGAGTCAGACTCAACTCTCTCACATGATCTTGATCACGTTGATACTGCTGAAATCAGTTATCCTGTTAGAGACGAGATAGTTGCGGAAGGTAATTTAGAATTCACAAAAGATATTATTGTTTTGGAATCTTCCTCAGATCCAAACTGCTGTACTGCAGGGAAGGACCAAAATCATGATGTCTCAAAAATTGCTGTTGATGCTATATGTTCTGAATGTTTGAATGGGGATTTAAAAGAGAACCAACAATCATCTCCACTATCTTCCCCTTCTCACTCTTCCATCACTGAGAAAATGGAAGAGCTAGAAAGTTGTACAGATTTATCTGGTCGACCAAGTCCAGTATCTGTGCTCGATATACCGTTCTCCGATGATGACCCTGGCTACTCCACATGTCAGCCTGTTAAATTATGCATACAATCACTACAAATTCGATTTGAGGAACAAGACTGTTCATCGTTGGATCGATTTCATAGAAGAAAATCTTGTCTGGAAGAAAATGAATTGATATATGACTACATAAATGCTGTCTTCCACGCCGCTAGCTTGACACAAGATCAACTATTGATGAAATGTCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCAAACATGCTTTGCCACGAACAGAAGCTCCTATTCGACTGTATCAACGAGGTTCTCATGGAGGTTTGTTGGAATTACTTTGGGGTTTCACCTTGGGTATCATTTGTAAATCCGAGTATAAGGCCAACTCCAAATATGAAGAAGATTATTCTCAAGGTCTGGGAAGGAGTGTGTTGGCATGTCCTTCCTTTACCCCCACCGCATACTTTGGAACAAATTGTTAGGAAAGACATGGCAAGAAATGGAACATGGATGGACCTTCGACTCGATGCTGAAACAGTTGGTTTTGAAATGGGTGATGTCATTCTTGTAGAGCTGATGGAAGATGCAATATTGAGCTTTGTGAATCAAAGTACAGAAAGTTAA 2733 0.3805 MTKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRKLIADKRHNNKHALGAVLTKNKFEALSNLDEEYQGNMDRGESKRLTVTTDADKLSVKKLIEEEMFIDQDEIKDQGNVVESTRTELGSEDSLKTDSKRKRKSRKKSRDMDSNDLSATLKSEVTHNQHSNQQSRDNIDLDKIMEDFCQIERACSLMHDDDDSKVLAQSNQKNINSEELARDAIHDFVNQMILNGKDMVEDKKFLCSHELMETLQVISSDKELFLKLLQDPNSHLLRYIQELENAQGRSEKEYNSVADSNFSEQDLGNLKQTRDIVNRKHHKFFWKKVKSQSKVPTNKNVKTEVPNRIVILKPAPTKMQNSESENNVVSSLDSRDIVHYKDPSVRVGSPFSLTEIKRKLKHAIGKEKHGNHKLPAERQNNDSRGKAICKDKTGMKSPNKDHFFIEKIARPMFDVVKGTKTGINESGSSKEKVSNLYIEAKKHLSEMLVDNGDDNTSISSRQIPKTLGRILSLPEYNFSPLGSPGGNLEHNFLTTHARLSTSDKTWEVNEDSLSPKQDTYIEQPYQETNNSRNQSSVCDKRSNEVPEIESDSTLSHDLDHVDTAEISYPVRDEIVAEGNLEFTKDIIVLESSSDPNCCTAGKDQNHDVSKIAVDAICSECLNGDLKENQQSSPLSSPSHSSITEKMEELESCTDLSGRPSPVSVLDIPFSDDDPGYSTCQPVKLCIQSLQIRFEEQDCSSLDRFHRRKSCLEENELIYDYINAVFHAASLTQDQLLMKCLSSDKILDPSLFDQVEFFSNMLCHEQKLLFDCINEVLMEVCWNYFGVSPWVSFVNPSIRPTPNMKKIILKVWEGVCWHVLPLPPPHTLEQIVRKDMARNGTWMDLRLDAETVGFEMGDVILVELMEDAILSFVNQSTES* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1990 910 MobiDBLite consensus disorder prediction 150 167 - -
Tpr6g1990 910 PANTHER (, RELATED) 1 907 - -
Tpr6g1990 910 Pfam Protein of unknown function (DUF3741) 222 266 IPR022212 -
Tpr6g1990 910 MobiDBLite consensus disorder prediction 113 171 - -
Tpr6g1990 910 Pfam Domain of unknown function (DUF4378) 751 898 IPR025486 -
Tpr6g1990 910 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1990 Tpr-Chr6 21590490 21596565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1990 1 886 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.630 1.46e-108 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1990 - - gmx:100783243 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1990 6 21590490 21596565 Tpr5g1282 5 25232996 25239012 PCT