Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1985 ATGGATAAAGAGGAAGCCCCACAAATCCCCAGAAGAACAACAAGGTCTTTATCTTCAACATCGACTTCAAATACTAAAACTGCATCAAAAGAAAACAACAGCCTTGAATCCCTAACAATCAATGACCTTTTGGTTGGAGGAGACCCTATTAGCCTAGATGATATCATTTCCAGTTTTCCCGGTAGAAGTACTCAGATTCATGAGATTGTGCGTCTTTTAGGACCTTTGAATTCGCCAATACTTCCTATGTTTGTGTATGGAGGTGCTTCTACTGGAAAAACCAGTATCATTCTTCAATTATTCAAACATCTCCAAAGGCCTCTTGTTTATTCTAGTTGTAGGACGTGTTATAACCAACGTATCTTGTTCGAGTCTGTTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATTGTTATACAAATGCAAAGCGTTGTGAAAGACCGTCCGATTTTATCAATTTTCTTCGTGAAGCATTGACTAGTGTTATAGACAATCTGAAGGTGAAATCAGAAAAATCGATCTCAGAAAAGAATATACATGGGGGAATGGGAAATATGATCTACTTGGTATTTGACAATTTTCATCTTGTTCGAGATTGGGACAAAAGCTCGACGATATTGCCCTTACTGTTTAATCTCCATGATATGCTAAAGATGCCTGAGGTTAGTCTGATTTTCATCAGCAGTACTTCACCAGATACCTTTTACTCTACTAACATGGGTTATGTGGAGCCTATCCCCATTTACTTTCCGGATTACACAGAAGGTGATATGCGTCAAATCTTATTGAGAAACCAAGCAAACCAGAAGTTGTATTCCTCATTTCTCGATGTAGCTCTGAGGCCTTTCTGCAGAATTACTAGGCAAGTTGGTGAGTTGTCTTCTGCATTAAAGCCACTATTTGAAAAATATTGCGAACCTTTAAGTGATAAGGGAAAGGGGGTTGTTCCTAATGAAGACATGAAGAGGAGGCTATTCAATCACATCAAGCCTCATATTGCTTCCTCTCTGAATGATGTATTTAAGGTTTTATCTCCTCCTTCAAGTGAAGCTGAATGTGGTAAAGAGACAAAGCTTAAGGGGAATCTGAAGAGATCGGAGGAAATCGGTGATCTTGATTTTCATATGTCGACCAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCCTCCAGAAACCCTGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGAAAGAGGAAGGCCTCTGAGAAAGCGCTCGAAAAGAAGGAAATGTTAGAAGAGGAACTACTGATGAAAGGACCTGGAACTTTCCCAATGGAGAGATTGATAGCCATCTTTCAGTGTATTGTTTCTGTTGGAGAAGATCCATCTGATGAAGAGGAAAAAAACAATGAAGAATTAGGAGCTCAATGTGGCAGCGGTTCACTGATGTCTGATGTTCTTTTGCAGCTATCCACTCTCTGCAATGCTAATTTTATTTTCAGAGGAAAGAGTTGTCCAATTGAAGGCTCTACTCGTTATCGATCAACTATATCTGAAGACCTGGCTTTAAAGGTTGCCAGGAGCCTAAAGTTCCCACTGTCAAAGTATCTGTACAGAAGTTAG 1620 0.3938 MDKEEAPQIPRRTTRSLSSTSTSNTKTASKENNSLESLTINDLLVGGDPISLDDIISSFPGRSTQIHEIVRLLGPLNSPILPMFVYGGASTGKTSIILQLFKHLQRPLVYSSCRTCYNQRILFESVLNQLLLHRKNAANCYTNAKRCERPSDFINFLREALTSVIDNLKVKSEKSISEKNIHGGMGNMIYLVFDNFHLVRDWDKSSTILPLLFNLHDMLKMPEVSLIFISSTSPDTFYSTNMGYVEPIPIYFPDYTEGDMRQILLRNQANQKLYSSFLDVALRPFCRITRQVGELSSALKPLFEKYCEPLSDKGKGVVPNEDMKRRLFNHIKPHIASSLNDVFKVLSPPSSEAECGKETKLKGNLKRSEEIGDLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKASEKALEKKEMLEEELLMKGPGTFPMERLIAIFQCIVSVGEDPSDEEEKNNEELGAQCGSGSLMSDVLLQLSTLCNANFIFRGKSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1985 539 Coils Coil 413 433 - -
Tpr6g1985 539 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
Tpr6g1985 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 325 IPR027417 -
Tpr6g1985 539 MobiDBLite consensus disorder prediction 1 32 - -
Tpr6g1985 539 Gene3D - 59 240 IPR027417 -
Tpr6g1985 539 MobiDBLite consensus disorder prediction 11 32 - -
Tpr6g1985 539 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 536 IPR020796 GO:0000808|GO:0005634|GO:0006260
Tpr6g1985 539 Pfam AAA ATPase domain 59 218 IPR041664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1985 Tpr-Chr6 21524766 21528630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1985 3 538 Core DNA Replication Machinery Family AT4G29910 58.178 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1985 K02607 - gmx:100782175 790.415