Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1967 ATGGTGACTGATGACAGTTCTTTCAGACAATATTATTATGTAACAGATATTGCGCCTGTGATTGAGGGTGCTGTTCACCACATCGGTTCAAGAAGATTTGAGTTTGGAGGTACTGATCTAACTAATTTCCTGGCTCAAAAACTCGGCAAATCAAATCCGCAAGTAAATATCAGCATGTCTGATGTGGATCAAATAAAAGAGCAATATTCATGCTGTGTTGAAGATGAGTTAGCTTATCAGAAAACCCAATATTCTTGTCCTGTGGAGAAACATACGCTTCCTGATGGACAGGTGATAACAATTGGGAGAGAAAGATGCACAATTGGCGAAGCTTTATTCCAGCCATGTCTGTTGGGTTTAGAAGCTCATGGCATTGTTGAACAGCTTGTCCGTGCTATGATTGGTTTGTGGTGGCACTTCTTCTATGATTGA 432 0.4051 MVTDDSSFRQYYYVTDIAPVIEGAVHHIGSRRFEFGGTDLTNFLAQKLGKSNPQVNISMSDVDQIKEQYSCCVEDELAYQKTQYSCPVEKHTLPDGQVITIGRERCTIGEALFQPCLLGLEAHGIVEQLVRAMIGLWWHFFYD* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1967 143 PANTHER BNACNNG31150D PROTEIN 15 133 - -
Tpr6g1967 143 Gene3D Actin; Chain A, domain 4 35 122 - -
Tpr6g1967 143 PANTHER ACTIN 15 133 IPR004000 -
Tpr6g1967 143 SUPERFAMILY Actin-like ATPase domain 14 133 IPR043129 -
Tpr6g1967 143 Pfam Actin 14 123 IPR004000 -
Tpr6g1967 143 Gene3D - 14 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1967 Tpr-Chr6 21298563 21313302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1967 14 127 Cytoskeleton Gene Families AT3G18780 37.288 2.63e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1967 K16615 - gmx:100813266 221.861