Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1936 ATGTTCCCTTTGAATAATCATTGGAACCAATATGGTGTGGTTTGTACTTTGTCAGGGGCAACACCAAAGGGCATATTGAAGGTAATGACGGCTATGGGGATTTCAGAGTTGAGTATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCACTACAAGAGGAAAGACTGAGAAGAAAAGCATATCAGATATACTGCCAAATTTCTGTTCTATATCTGCTCTTCAGCTAAAGGAAGTCCTTCAAATGCAAGCAGAGGTGCAAAAACGCATGGATGACAGAGTTGAGGTTCAAAAAATCTTGAAGCTGAAAATTGAAGCACAAGGAAAGTACCTAGACAGAATTGGACAAAGTAATCAAAGCAGAACAATTACAAGAAAAGCTTTCAAGCCTTTTGTTGGCAAAGCTACACATCTGCCCTCTCTTTCTGAGGAATCTGAATCCTTAAAAACACAATCTGAGGAAGAACATCAAGCAGCCAAAAAGCTAAAGAACATAGATGATGATGTTTTGCCTACAGGTTTTGAACTAGGACCATCAACAGTCTCAGAATTCTGCAACCAAACCTGGAATAACCTTTCTTGGATTCAGCTAGCTGAAACAACATGCCAATCACCTTTGGTGCCTGGTTTCTTATTATAA 663 0.3937 MFPLNNHWNQYGVVCTLSGATPKGILKVMTAMGISELSIYHVKSHLQKYRISKLIPESTTRGKTEKKSISDILPNFCSISALQLKEVLQMQAEVQKRMDDRVEVQKILKLKIEAQGKYLDRIGQSNQSRTITRKAFKPFVGKATHLPSLSEESESLKTQSEEEHQAAKKLKNIDDDVLPTGFELGPSTVSEFCNQTWNNLSWIQLAETTCQSPLVPGFLL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1936 220 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 20 127 IPR044848 GO:0003700
Tpr6g1936 220 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 52 IPR006447 GO:0003677
Tpr6g1936 220 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 20 127 - -
Tpr6g1936 220 MobiDBLite consensus disorder prediction 155 169 - -
Tpr6g1936 220 Pfam MYB-CC type transfactor, LHEQLE motif 83 126 IPR025756 -
Tpr6g1936 220 MobiDBLite consensus disorder prediction 150 169 - -
Tpr6g1936 220 Gene3D - 6 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1936 Tpr-Chr6 21014136 21016291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1936 32 122 G2-like Transcription Factor Family AT2G01060 53.261 6.02e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1936 - - gmx:100527384 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1936 6 21014136 21016291 Tpr6g1936 6 21014136 21016291 ECH