Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1934 ATGAAACCGAACATCGATGAACCCGACATTGCACAACCTAATGTAGTTGAACCCACAAATATTTTGGTTAACACTGCCAATTATTTTTTTAAGTGTGAAAAGTATAAGGTCCGAGATGAGATGATTGAATGGTGCAAAAAAGAGGCTATAAAAGCTGGATTTACTATGGTGATTGTGAAATCAGATAACGGTTCTTACCGAAGGAAAAAGACTTTAGTATTGGGTTGCTCAAGAGGCGGTGCGTACAAAGAACCGAATAGGAAATTGAAGAAAGAAGACACGGCTACGAGGAAATTGAACTGTCCGTTCAGACTGCGAGGTTACTTTTTGGCATCAGAGGAATGGAGACTAAGTGTTGTGTGTGGTGAACATAACCACAAGTTGGCAAAAAATCTAGAAGGTCATACTCTTGCCGGACGTTTAAAACCAGAGGAGAAGGAGTGTGTGCAGGAGTTGTCAAAGAATTTGGTGGCCCCGAAGAACATATTGTCGACACTGAGAGGGAGAAATCCGGATATCAAGACTTCAATGAAGCAAATATACAATGTGCGCCAAAGGTTAAAAAAAGATGCTAGGGGTCAAATGTCTGAATTGCAACAACTCATGAAGTTGTGTGAAAACAACAAATATTTTCACAAGTGTAGAACAATTGGTGACTCGACTACTATACAAGATATTTTTTGGGCACATCCTGAAAGTGTGAAATTGCTTAACACTTTCCCTACTGTTTTAGTGATGGATTCAACGTACAAAACCAACAAGTATAAAATGCCTTTATTTGAGATAGTTGGCGTAACTTCAACCGAGGTGTCGTACAATGTTGGTTTTGCCTATATTGCCAATGAAAAAGAAGACAATTTCACATGGGCCCTTGAGACGTGTCAGAGTCTTTTGAACAGTAAAGACACAATGCCGAAGGTCATTGTCACTGATAGGGATCAGGCACTGATGAATGCAGTTGCGAAAGTGTTTCCAAATTCAACTGCTTTATTGTGTCGGTTACATGTTTTTAAGAACGTAAAAGCTAAGTTCAAGAATCTTTGCACCGCAAAAGGAGAAAAGATGAATCAATTACTGAACACACTCACATTTCAATGGAAATCAATTATTCAGTCGACTTCAGAAGATTCATATATTGATGCAGTTCTTGAGTTCAGGAAAGCGTTTGACCACTATCCAGATTTTCTTAAATATGTTGAAACAACTGTTCTAGATCCGGTGAAGGAAAAAATCGTGAGCTTATGGATAGATCGTGTTATGCACATTGGCAACACTACCACCAACAGAGTTGAGTCACAACATGGTTCGTTGAAAGAGTATTTGCCGGATTGTAAGGGTGATTTGCCGGAGTACCAACTTATATCTTGA 1368 0.3911 MKPNIDEPDIAQPNVVEPTNILVNTANYFFKCEKYKVRDEMIEWCKKEAIKAGFTMVIVKSDNGSYRRKKTLVLGCSRGGAYKEPNRKLKKEDTATRKLNCPFRLRGYFLASEEWRLSVVCGEHNHKLAKNLEGHTLAGRLKPEEKECVQELSKNLVAPKNILSTLRGRNPDIKTSMKQIYNVRQRLKKDARGQMSELQQLMKLCENNKYFHKCRTIGDSTTIQDIFWAHPESVKLLNTFPTVLVMDSTYKTNKYKMPLFEIVGVTSTEVSYNVGFAYIANEKEDNFTWALETCQSLLNSKDTMPKVIVTDRDQALMNAVAKVFPNSTALLCRLHVFKNVKAKFKNLCTAKGEKMNQLLNTLTFQWKSIIQSTSEDSYIDAVLEFRKAFDHYPDFLKYVETTVLDPVKEKIVSLWIDRVMHIGNTTTNRVESQHGSLKEYLPDCKGDLPEYQLIS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1934 455 Coils Coil 184 208 - -
Tpr6g1934 455 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 447 IPR031052 GO:0006355
Tpr6g1934 455 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 75 447 - -
Tpr6g1934 455 Pfam Transcription factor AFT 30 128 IPR014842 GO:0000981|GO:0036086
Tpr6g1934 455 Pfam MULE transposase domain 243 339 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1934 Tpr-Chr6 21005335 21006702 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g1934 AFT 2.2e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1934 - - vun:114172722 364.77