Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1929 ATGGAGGGTCATCATCTCCATCATCATCAACAACAACATCAACAACAACAACAACAACATCATCAACAACAACAAAGACAACAACAACAACAACATCAACAACATGCTCATAACATCATAGGTACTAGTAGTGTTAACGTTGATGTCACAGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAAGAGTTTCTTATGATCCGTTCTGATCTTGATCAAACTTTCATGGAGACAAAGAGGAATAAGCAACTTTGGGAAGTTATCTCTAACAAAATGAAGGAAAAGGGTTATCATAGAAGTGCTGAACAGTGTAAGTGCAAATGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGCTAGAAGCTATGAGACAACAATTTCCATATTACAATGAGCTTCAAGCTATATTTAGTGCAAGGATGCAAAGAATGCTTTGGGCTGAAGCAGAAGGAGGGTCAAAGAAGAAAGGGATGCATGTGTCTTCTGAGGATGAGGAAGAGTTGGGAAATGAAGAGAGTGAGGGAGACCACAAAGGCAACATTAAGAAAAAGAAGAAAAAGGGTAAAATGGTAATTGGTGGAGGAAATGATAGTGGTAGTACTAGCAATAATTTGAAGGAGATTCTTGAGGAGTTTATGAAGCAACAAATGCAAATGGAAGCTCAATGGATGGAAGCATTTGAGGCAAGAGAGAATGAGAGAAGGTTGAAGGAAATGGAATGGAGGCAAACAATGGAAGCATTGGAGAATGAGAGGATAATGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGAAGGGTTAGAGAAGAAGCTAGGGCTGAAAAAAGAGATGCATTAATCACTATTCTTCTTGATAAGCTCACAAGAGAAGACATGTAG 891 0.385 MEGHHLHHHQQQHQQQQQQHHQQQQRQQQQQHQQHAHNIIGTSSVNVDVTDRFPQWSIQETKEFLMIRSDLDQTFMETKRNKQLWEVISNKMKEKGYHRSAEQCKCKWKNLVTRYKGCETMELEAMRQQFPYYNELQAIFSARMQRMLWAEAEGGSKKKGMHVSSEDEEELGNEESEGDHKGNIKKKKKKGKMVIGGGNDSGSTSNNLKEILEEFMKQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERIMMEQRWREREEQRRVREEARAEKRDALITILLDKLTREDM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1929 296 MobiDBLite consensus disorder prediction 12 43 - -
Tpr6g1929 296 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 294 - -
Tpr6g1929 296 Gene3D - 56 117 - -
Tpr6g1929 296 MobiDBLite consensus disorder prediction 153 167 - -
Tpr6g1929 296 ProSiteProfiles Myb-like domain profile. 56 112 IPR001005 -
Tpr6g1929 296 Coils Coil 241 268 - -
Tpr6g1929 296 MobiDBLite consensus disorder prediction 1 43 - -
Tpr6g1929 296 CDD GT1 54 119 - -
Tpr6g1929 296 PANTHER - 1 294 - -
Tpr6g1929 296 Coils Coil 6 26 - -
Tpr6g1929 296 Coils Coil 205 225 - -
Tpr6g1929 296 Pfam Myb/SANT-like DNA-binding domain 55 139 IPR044822 -
Tpr6g1929 296 MobiDBLite consensus disorder prediction 153 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1929 Tpr-Chr6 20926254 20928484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1929 31 294 Trihelix Transcription Factor Family AT2G38250 53.069 1.09e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr6g1929 Myb_DNA-bind_4 2.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1929 - - gmx:100794230 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1929 6 20926254 20928484 Tpr6g1929 6 20926254 20928484 ECH