Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1925 ATGACTGATGCAAATGTTGCTGCATTTGATGAATTTCTCCATGGATGGATTATTCGTCAAAGAAACTATCTTGATGAGCTTCTCTCAGCTCAACAACAGCAACAAGAGTTGGATGATTCTGATAGAAGGAATTTGTTAAACAGGGTACTCTATCACTATGGACAATACTATGAAGAGAAATCAAAGATAGCCCATCAAAATATTCTCCTTCTTTTCTCACCACCATGGTTTAGTTCATTGGAAAGAGCCTTTCTTTGGGTAGCAGGGTTCAAACCAGGACTTACATTTCAACTTGTGAACAAAACTTTGGAGGATTTGTCAGAGGATCAGAGGCAGAGGTTGAGTGAACTCAAACAAGAGACAAAGATGAAGGAGAGAGAACTCAATGATGAATTGGCTAAGGTTCATGAGAGTATGGCAGGTCTACCACTTGTTGACATGATTAGAAGCCATGGAAGAGTGTGTTTGAGTAGGTCATTCATGGCAGAGGAAGGTACAGTTCCAAGTACAGTGAAGGAAACATTGGAGAATCTGGTAACAAATGCTGATACTTTGAGGACTGAGACAGCTTTGAGAGTTGTGCAGATGTTGAAACCAGCTCAGGTTCTCAACTTTTTTGTTGCTGTGGCTCAGCTTCAACTCAAGATCAGGTCTTTGGGTTTGGATAAGGATGCTCAGAGTGAAAACCAAGGTTGA 696 0.408 MTDANVAAFDEFLHGWIIRQRNYLDELLSAQQQQQELDDSDRRNLLNRVLYHYGQYYEEKSKIAHQNILLLFSPPWFSSLERAFLWVAGFKPGLTFQLVNKTLEDLSEDQRQRLSELKQETKMKERELNDELAKVHESMAGLPLVDMIRSHGRVCLSRSFMAEEGTVPSTVKETLENLVTNADTLRTETALRVVQMLKPAQVLNFFVAVAQLQLKIRSLGLDKDAQSENQG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1925 231 Coils Coil 100 134 - -
Tpr6g1925 231 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 229 - -
Tpr6g1925 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Tpr6g1925 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Tpr6g1925 231 PANTHER - 5 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1925 Tpr-Chr6 20869466 20871258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1925 8 219 bZIP Transcription Factor Family AT5G06960 27.358 1.25e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1925 - - gmx:100780874 327.02