Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1915 ATGTCACTCTCTTGGATACCCCTTCTCCCGCATATAATTCAGGCACTGACTGGTCGTCGGCCATCCGTTCAGAGAGGTACAGATGATAAAACCCAAAGCTATAGATACGATGTGTTTATCAGTTTCAGGGGTCCTGACACGCGCAACACCTTTGTTGACCACCTCTACTCTCATCTCATTAGAAAAGGTATTTTCACTTTCAAAGATGACAAACAACTTCAGAAAGGTGAATCCATTTCACCTCAACTTCTACAGGCAATTCAACATTCACGGTGTTCTATTATTGTTTTCTCAAAAGATTATGCTTCCTCAACTTGGTGTTTAGATGAAATGGCTGCCATTGCTGATTGCCGTGCTAAATTTAAACAAATTGTGTTTCCTGTTTTCTATGATGTTGATCCATCTCACGTGCGAAACCAGAATGGAGTTTTTGAGAATGCTTTTGTTTTACACACTGAGAAATTCAAAGATGATCCACACAAGGTTGATGGGTGGAAGAGAGCTATGACTTGTTTCGCTGGATTGACCGGTTGGGATGTCAGGAATAAGCAAGAAGTTGAAGAGATTGAAAATATTGTCCAGACTGTAATAGAAAAGTTGGGTCATAAATTCTCAGGGTATGCTGATGACCTTATCGGAATACAGCCTCAAGTAAGAGCATTAGAAAAACTTTTAAAACTAAGCTCACATGATGACCGTTGTCTAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACAACTCTTGCAACTGTCTTGTATGACACAATCTCACATCACTACCAATTTGGTGCTTGTTGTTTTATCGAGAATGTTAGCACAATTTATAGAGAGGATGGTGCTATTGCTGTCCAGAAACAAATTCTTCATCAAACTCTGAAAGAAAAAAATCTTGATGCATACAGTCGCTCTGAAATATCTGGAATTATAATAAATAGGTTAAAGAACATAAAGGTCCTTATAGTTCTAGACGACGTTGATAGTTTTGTGCAACTACAAGAACTGCACCTAAATCCTAGATTGCTTCATCCAGAAAGTAGAATAATCATAACCACTATAGATTTGAATATTCTTGAATTGTATGGAGCGGATAAAATTCACAAGGTTGAATTGATGAATTATATTGACGCTCGTAAACTTTTATGTAGAAAAGCCTTTCAAAGTGATAATTCAAGTAGTGATTATGCCGAACTTATTCCCAAGGTTCTTGAATATGCTCAAGGTCTTCCATTAGCAATTAGAGTAATGGGATCTTTCTTGTTTAATAGAGATACCAAAAAATGGAGAGCTACCTTGGATGGATTGGAGAAAAATCCAAATAGTGGAACTATGAAAGTGCTTCAGTCGAGTTTTGAGGGACTCGAAAATAGAGAGAGAGAAATATTTTTGCATGTTGCTTGTTTCTTTGAAGGGGAGAGGGAGGATTATGTGAGGCGAATTCTACATGCTTGTGAATTGCAACCTGATATTGGAATTTCACTTATTGTTGAAAAATCATTCATAACCATTAGAAACCAGGAAATTCATATGCATAAAATATTGCAAGAGTTGGGGAAGCAAATTGTTCGGAAAGAACATCCTGATGAGCCAAGATTATGGAGTAGACTGTGGCTTTATCGTGATCTCAATGATGCAATTAGAAAACTGAAAGCAATAAAAGCTAAAGCCATAATTCTAAATCAAATGGAGGATGTTAGCAAATTCAAACAGTTGAGGGATGAAGATTTATCAAAAATGGAGAACTTGAAACTGCTCATATTAAATCAATCAAAATTTTCAGGAAGCTCCAAATTTCTTTCCGATTCCCTATGCTATCTTTTGTGGAATGGTTGTCCTTTGACGTGTTTGCCATCAAACTTTCAACCATATAACCTTGTAGAATTGAATATGCCGGATAGTAGCATTGTGCAACTATGGGAAGAAATCCAGGATCTCCCCAATTTGAAAAGGATGGAACTGAGCAACTCCAAAAATCTAAAGGTGACTCCAAGGTTTGAAGGGATGCAAAATCTTGAGCGGTTAGATCTTACAGGATGCATAAATTTGTCGGTGGTGCATCCATCAATTGGACTCCTTACAAAACTAGAATTTTTGAGTTTGCAAAACTGTACTAGTCTAGTCACCCTTGTTTTTCGCTATGCACCAAGACTAATGTCTTTGAGAGTTCTTAGTCTCTCTGGCTGTACAAAACTTGAAAACACTCTGAATTTTACCGAATTATCAAATCTCCAGTACCTAGATATGGATCGATGTGCAAGTTTATCCACAATTCATGAATCTGTTGAGGCTCTTGAAGAGCTTACATTTTTAAGTTTGAGAGAGTGCACAAATCTTGTTGGAATACCTGACGGCCTTAATAATATGACATCTCTTACAACTCTAGATCTATATGGCTGCTTGAAATTTACCAATCTGCCCCTGAGAGTTGTCAATGATCATTCTTCCCTAGAATCTCTGATTTTTCTGGACTTAAGCTTTTGCAATATTTCTAAAGTACCTAAGGATATTGGAAAATTAAGGTGTTTAGAAAGACTAAATCTTCAGGGAAATAAATTTACTGAACTTCCTTCCAGCTTGAGTTGGCTTGACAATCTATCATATTTAAACTTGTCTCACTGTCATAAGCTTCAAAGTTTGCGTTATCTCCCAAAAAGAAGTGGTCAATCAAATTCTGCGGGAAGATATTTTAAAACAACATCTGAATCCCGTAATCATAGATCAGGATTATATGTGTTTGACTCTCCCAATTGCACGCAGTGCAGATTCTTTGTCAACGCCCTCATCCAGAGATGGATACTAACAATGTTTGAGGAACCTCTTTCCTTTCGGTGTGGCTTTGACATTGTTCTTCCTTGGTACAAGAATACTAGTGATTCTGTTGGAAATCACTTCATTTCAATATTTTTTCATCATCGGTTTGAAGGGGGTTCAATAGTAAGAATAAATGACCCTGTCATGGATGTTTGCCTCGGTTTTCTCTTTTATGTAACATTTGAGTTAAATAATCACCCTGTACTATCTAGTTCTTCACATCAATCGCTCTCTTCGTCACTGCCACATCCTTTTTATCTTTCTTTTGAGAGTGAATACACCGAAGAACGCTTTGATATGCCACTTAATTTGGAACTAAACAAGATTGACGGCTTAAACTACATTTGGGTAATCTATATTTCTCAGGAACACTGCCATTTTGTGAAAACAGGGGCACACATCACATTTAAAGCCCGCCAAGGTTTGATTATCAAGGAATGGGGATTGCTTCCCTTAACCAAGATAAACACAGAGGAGGGCGGAGAAATTGAATTTGATGCACCATCTCTTTCTTTGGAGAATGTGAATATAAAACAAAGAAGCAGCGGCAGTAGCTGTATGCCTAAAATCCAATTTCCTTACAACTGGTTTGTTTCTGACAAAGATGAAGCTGAGAGGGATGAAGCCAAGGGAAAAGAAACTGATCTCTTTAATCTTGGCCTTTTAACTGAAAGTTCACAATTGTTGTAA 3504 0.3739 MSLSWIPLLPHIIQALTGRRPSVQRGTDDKTQSYRYDVFISFRGPDTRNTFVDHLYSHLIRKGIFTFKDDKQLQKGESISPQLLQAIQHSRCSIIVFSKDYASSTWCLDEMAAIADCRAKFKQIVFPVFYDVDPSHVRNQNGVFENAFVLHTEKFKDDPHKVDGWKRAMTCFAGLTGWDVRNKQEVEEIENIVQTVIEKLGHKFSGYADDLIGIQPQVRALEKLLKLSSHDDRCLVLGIWGMDGIGKTTLATVLYDTISHHYQFGACCFIENVSTIYREDGAIAVQKQILHQTLKEKNLDAYSRSEISGIIINRLKNIKVLIVLDDVDSFVQLQELHLNPRLLHPESRIIITTIDLNILELYGADKIHKVELMNYIDARKLLCRKAFQSDNSSSDYAELIPKVLEYAQGLPLAIRVMGSFLFNRDTKKWRATLDGLEKNPNSGTMKVLQSSFEGLENREREIFLHVACFFEGEREDYVRRILHACELQPDIGISLIVEKSFITIRNQEIHMHKILQELGKQIVRKEHPDEPRLWSRLWLYRDLNDAIRKLKAIKAKAIILNQMEDVSKFKQLRDEDLSKMENLKLLILNQSKFSGSSKFLSDSLCYLLWNGCPLTCLPSNFQPYNLVELNMPDSSIVQLWEEIQDLPNLKRMELSNSKNLKVTPRFEGMQNLERLDLTGCINLSVVHPSIGLLTKLEFLSLQNCTSLVTLVFRYAPRLMSLRVLSLSGCTKLENTLNFTELSNLQYLDMDRCASLSTIHESVEALEELTFLSLRECTNLVGIPDGLNNMTSLTTLDLYGCLKFTNLPLRVVNDHSSLESLIFLDLSFCNISKVPKDIGKLRCLERLNLQGNKFTELPSSLSWLDNLSYLNLSHCHKLQSLRYLPKRSGQSNSAGRYFKTTSESRNHRSGLYVFDSPNCTQCRFFVNALIQRWILTMFEEPLSFRCGFDIVLPWYKNTSDSVGNHFISIFFHHRFEGGSIVRINDPVMDVCLGFLFYVTFELNNHPVLSSSSHQSLSSSLPHPFYLSFESEYTEERFDMPLNLELNKIDGLNYIWVIYISQEHCHFVKTGAHITFKARQGLIIKEWGLLPLTKINTEEGGEIEFDAPSLSLENVNIKQRSSGSSCMPKIQFPYNWFVSDKDEAERDEAKGKETDLFNLGLLTESSQLL* 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1915 1167 Pfam Leucine Rich Repeat 625 644 IPR011713 -
Tpr6g1915 1167 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 178 IPR035897 -
Tpr6g1915 1167 PRINTS Disease resistance protein signature 236 251 - -
Tpr6g1915 1167 PRINTS Disease resistance protein signature 314 328 - -
Tpr6g1915 1167 PRINTS Disease resistance protein signature 407 421 - -
Tpr6g1915 1167 PRINTS Disease resistance protein signature 644 660 - -
Tpr6g1915 1167 Pfam NB-ARC domain 226 442 IPR002182 GO:0043531
Tpr6g1915 1167 Pfam Leucine rich repeat 823 875 IPR001611 GO:0005515
Tpr6g1915 1167 SMART LRR_typ_2 817 839 IPR003591 -
Tpr6g1915 1167 SMART LRR_typ_2 741 765 IPR003591 -
Tpr6g1915 1167 SMART LRR_typ_2 840 863 IPR003591 -
Tpr6g1915 1167 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)-RELATED 35 890 - -
Tpr6g1915 1167 ProSiteProfiles TIR domain profile. 34 200 IPR000157 GO:0007165
Tpr6g1915 1167 Gene3D - 207 366 IPR027417 -
Tpr6g1915 1167 ProSiteProfiles Leucine-rich repeat profile. 842 863 IPR001611 GO:0005515
Tpr6g1915 1167 Gene3D Ribonuclease Inhibitor 540 737 IPR032675 -
Tpr6g1915 1167 Gene3D Ribonuclease Inhibitor 738 892 IPR032675 -
Tpr6g1915 1167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 465 IPR027417 -
Tpr6g1915 1167 SUPERFAMILY "Winged helix" DNA-binding domain 446 545 IPR036390 -
Tpr6g1915 1167 SUPERFAMILY L domain-like 572 881 - -
Tpr6g1915 1167 Gene3D - 32 206 IPR035897 -
Tpr6g1915 1167 Pfam TIR domain 36 203 IPR000157 GO:0007165
Tpr6g1915 1167 Gene3D - 373 456 IPR042197 -
Tpr6g1915 1167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 890 IPR044974 GO:0006952
Tpr6g1915 1167 SMART till_3 35 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1915 Tpr-Chr6 20760241 20767550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1915 212 881 WRKY Transcription Factor Family AT5G45050 31.375 1.42e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1915 - - mtr:MTR_5g005550 1329.31