Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1914 ATGGACTCAAACTCATCGTCAACAAATTCTGATAGTTTTACTTCGAGATCTTGGCTCTTGAGACCGTTACGTGCCCTGTGTGGCTGTCAGTCATTTTCCGATGTGAGCATGCTGGACCAAAAAGGTGCAACGTCTAGTTCTTCCCAGCATTCTGATAGCATTCAAAGCTATAGATATAGATATGATGTGTTTATCAGTTTCAGAGGTTCCGACACGCGCAACACCTTCGTTGATCATCTCTACTCTCATCTCGTCAGAAAAGGTATTTTCGTCTTCAAGGATGATAAACAACTTCAGAAAGGGGAATCCATTTCACCTCAACTTCTACAGGCAATTCAACATTCACGGGTTTCTATTGTTGTCTTTTCGAAAGATTATGCTTCATCAACTTGGTGTTTAGATGAAATGGTTGCCATTGCTGATTGCCGTGCTAAATTTAAACAAATTGTGTTTCCTGTTTTCTATGATGTTGATCCATCTCATGTGCGAAAGCAAAATGAAGTTTATGAGAGTGCTTTTGTTTTACACGCTGAGAAATTCAAAGATGATCCAGACAAGGTTGATGGGTGGAAGAGAGCTATGACTCGTTTCGCTGGATTGACAGGTTGGGATGTCAGGAATAAGCAAGAAGTTGAAGAGATTGAAAATATCGTCCAGACTGTAATAGAAAAGTTGGGTCATAAATTCTCAGGGTATGCTGATGACCTTATCGGAATACAGCCTCAAGTAAAAGCATTAGAAAAACTTTTAAAACTAAGCTCACATAATGACCGTTGTCTAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACAACTCTTGCAACTGTCTTGTATGACACAATCTCACATCACTACCAATATGGTGCTTGTTGTTTTATCCACAATGTTAGCGCAATTTATAAAGAGGGTGGTGCTGTTGCTGTTCAGAAACAAATTCTTCATCAAACTATGAAAGAAAAAAATCTGGATGCATACAGTCCCTCTGAAATATCTGGAATTATAACAAAGAGGCTATTTAACATGAAGCTCCTTTTAGTTCTTGATGATGTTGATCAAATTGGGCAGCTACAAGAATTGCACATAAAGACCGAATTGCTTTGTCCTGGAAGTAGAATAATCATAACAACTAGAGATGTGCATATTCTTAAATTGTTTGGAGCGCATAAAATTCATAAGGTCAATTTGATGAATGACAGTGATGCTCAGGAACTTCTATGTAGAAAAGCTTTTAAAAGTGATAATTCAAGCAACAACTATGCAGAACTCATTCCTAAGGTGTTAAAATATGCTCAAGGTCTTCCGTTAGCAATTAGAGTAATGGGTTCTTTCTTGTATACTAGAAATACCACCCAATGGAGAGCGATCTTGAACGGATTGGAGAATAATTCAGATTTTAGTGGAATTATGAAAGTGCTACGGTCAAGTTTTGAGGGACTAGAGCTAAGAGAGAGAGAAATATTTTTGCACGTTGCTTGCTACTTTGAAGGGGAGAGGGTGGAATATGTAGGGCGAATTCTAGATGCTTGTGGATTGCAGCCTGATATTGGAATTTCGCTTATTGTTGAAAAATCATTCATAACCCTTAGAAATCAGGAAATTCATATGCATAAAATGTTGCAAGAGTTGGGGAAGCAAATTGTTCGGGAACAACATCCTGATGAGCCGAGATTATGGAGTAGATTGTGGCTTTATTGTGATCTCCATGATGCGATTAGAAAACCGGAATCAATAGAAGCTAAAGCCATAATTCTAAATCAAAGGGAGGATGTCAGCAAATTCATACAGTTGAGGGATGAAGAATTAACAAAAATGAAGAACTTGAAAGTGCTCATATTGTATCATTCAAATTTTTCAACAAGCCCAAAATTTCTTTCTGATTCCCTATGCTATCTTTTGTGGAATGGTTACCCTTTCATGTCTTTGCCATCAAATTTTCAACCATACAATCTTGTAGAATTGAATATGCCTGATAGCAACATGGAACAACTATGGATAGGCATTCAGCATCTCCCCAAATTGGAAAGGATAGATCTCAGTAACTCCAAAAATCTGAAGGTGACTCCATGCTTTGAAGGGATGGAAAAACTTGAGCGGCTAGATCTTACAGGATGCATAAATTTGTTGGAGGTGCATCCATCAATTGGACTTCTTACAGAACTTGTATTCTTGAGTTTGCAAAACTGTACTAGTCTAGTCACTCTTGATTTTGGCAATGCACAAAGACTAAGGTCTTTGAGAGTTCTTCGTCTCGCTGGTTGTACAAAACTTGAAAACGCTCCAAATTTCAGTGGAACATTAATTCTTCAGTACCTTGATATGGATCGATGCACAAGTTTATCCACAGTTCATAAATCTGTTGGGGCTCTTGCAAACCTTAAATTCTTAAGTTTGAGAGACTGCACAAATCTTGCTGAATTGTTTATCAACTTTAATATAATGACATCTCTTGCAACTCTAGATCTTCATGGATGCTCTAAATTAATTGGGTTGTCATTGAGTCAGAATTCCACTTATTCTCTGCGATCTTTGGTTTTTCTAGACTTAAGTTATTCCAATATTTCTCTAGTACCTAATGCTATTGGAGAATTAAGATGTTTAGAAAGACTAAATCTTCAGGGAAATAACTTTACCGAATTACCCTCCACCCTCAATAGACTTTACAATCTATCATATTTAAACTTGTCACATTGTCATAAGCTTCAAAGTTTGCCTTATCTCCCAATAGAAAGTGGTCCATCAGATTCAGTGGGAAGATATTTTAAAACAACATCTGGATCCCGTAATCATAGATCAGGATTATATGTGTTTGACTCTCCCAATTGGTCGAAGTACGCTTGGAAGTTCGACTTTCGCATCACTAATTGGATACGAAGATTACTTAAGGAACCTCTTCACTTTCGTTGTGGCTTTGACTTTGTTATTCCTCGGTATGAGCATCCCGGTTATTCTGATGGAGATGAGCTCATTTCAAAGATTTTCGGCAATCAGTGGTTTGAAGGGGGTTCAATAGTAAGGATAAATGACCCTGTTATTGACGTCGACTGGCTTGGCTTTCTCTTTTGTGTAAAATTTGAGTTAAATAATCATCCTGAACAATCTAGTTCTTCACATCAATCGCTCTCTTCGTCACTGCCACATCCTTTTTATCTTTCTTTTGAGAGTGAATACATAGAAGAACGCTTTGATATGTCACTTAATTTGGAATCAAAAAAGGTTGATGGCTTAAACTATGTTTGGATGATCTATATATCTCGGGAACACTGCCATTTTGTGAAAACAGGAGCACACATCACATTTAAAGCCCATCAAGGTTTGATTATCAAGGAATGGGGGTTGCGTCTCATAACCAAGAAAGACACACAGGGCTCAATGATGGAAATGAGTGTACCAGTACATCTTCCTTTAAAGAATGTGAAAGTAAAACAAAGAAGCGGAAGCAGTAGTTTTGAGCCCAAAATCCAACTTCCTTACAATTGGTTTGTTTCTGACAAAGATGAAGCTGAGAGGGATGAAGCCAAGGGAAAAGAAACTCATCTCTTTAATCTTGGCCTTTTAAACGAAAGTTCACAATGA 3579 0.3769 MDSNSSSTNSDSFTSRSWLLRPLRALCGCQSFSDVSMLDQKGATSSSSQHSDSIQSYRYRYDVFISFRGSDTRNTFVDHLYSHLVRKGIFVFKDDKQLQKGESISPQLLQAIQHSRVSIVVFSKDYASSTWCLDEMVAIADCRAKFKQIVFPVFYDVDPSHVRKQNEVYESAFVLHAEKFKDDPDKVDGWKRAMTRFAGLTGWDVRNKQEVEEIENIVQTVIEKLGHKFSGYADDLIGIQPQVKALEKLLKLSSHNDRCLVLGIWGMDGIGKTTLATVLYDTISHHYQYGACCFIHNVSAIYKEGGAVAVQKQILHQTMKEKNLDAYSPSEISGIITKRLFNMKLLLVLDDVDQIGQLQELHIKTELLCPGSRIIITTRDVHILKLFGAHKIHKVNLMNDSDAQELLCRKAFKSDNSSNNYAELIPKVLKYAQGLPLAIRVMGSFLYTRNTTQWRAILNGLENNSDFSGIMKVLRSSFEGLELREREIFLHVACYFEGERVEYVGRILDACGLQPDIGISLIVEKSFITLRNQEIHMHKMLQELGKQIVREQHPDEPRLWSRLWLYCDLHDAIRKPESIEAKAIILNQREDVSKFIQLRDEELTKMKNLKVLILYHSNFSTSPKFLSDSLCYLLWNGYPFMSLPSNFQPYNLVELNMPDSNMEQLWIGIQHLPKLERIDLSNSKNLKVTPCFEGMEKLERLDLTGCINLLEVHPSIGLLTELVFLSLQNCTSLVTLDFGNAQRLRSLRVLRLAGCTKLENAPNFSGTLILQYLDMDRCTSLSTVHKSVGALANLKFLSLRDCTNLAELFINFNIMTSLATLDLHGCSKLIGLSLSQNSTYSLRSLVFLDLSYSNISLVPNAIGELRCLERLNLQGNNFTELPSTLNRLYNLSYLNLSHCHKLQSLPYLPIESGPSDSVGRYFKTTSGSRNHRSGLYVFDSPNWSKYAWKFDFRITNWIRRLLKEPLHFRCGFDFVIPRYEHPGYSDGDELISKIFGNQWFEGGSIVRINDPVIDVDWLGFLFCVKFELNNHPEQSSSSHQSLSSSLPHPFYLSFESEYIEERFDMSLNLESKKVDGLNYVWMIYISREHCHFVKTGAHITFKAHQGLIIKEWGLRLITKKDTQGSMMEMSVPVHLPLKNVKVKQRSGSSSFEPKIQLPYNWFVSDKDEAERDEAKGKETHLFNLGLLNESSQ* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1914 1192 Gene3D - 58 231 IPR035897 -
Tpr6g1914 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 491 IPR027417 -
Tpr6g1914 1192 SMART till_3 60 200 IPR000157 GO:0007165
Tpr6g1914 1192 PRINTS Disease resistance protein signature 261 276 - -
Tpr6g1914 1192 PRINTS Disease resistance protein signature 339 353 - -
Tpr6g1914 1192 PRINTS Disease resistance protein signature 432 446 - -
Tpr6g1914 1192 PRINTS Disease resistance protein signature 670 686 - -
Tpr6g1914 1192 SUPERFAMILY "Winged helix" DNA-binding domain 470 568 IPR036390 -
Tpr6g1914 1192 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 54 912 - -
Tpr6g1914 1192 Gene3D - 232 392 IPR027417 -
Tpr6g1914 1192 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 203 IPR035897 -
Tpr6g1914 1192 Pfam NB-ARC domain 251 464 IPR002182 GO:0043531
Tpr6g1914 1192 Gene3D Ribonuclease Inhibitor 591 769 IPR032675 -
Tpr6g1914 1192 Gene3D Ribonuclease Inhibitor 770 834 IPR032675 -
Tpr6g1914 1192 Gene3D Ribonuclease Inhibitor 835 920 IPR032675 -
Tpr6g1914 1192 Pfam TIR domain 61 229 IPR000157 GO:0007165
Tpr6g1914 1192 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 54 912 IPR044974 GO:0006952
Tpr6g1914 1192 SMART LRR_typ_2 865 888 IPR003591 -
Tpr6g1914 1192 SMART LRR_typ_2 842 864 IPR003591 -
Tpr6g1914 1192 SMART LRR_typ_2 606 629 IPR003591 -
Tpr6g1914 1192 ProSiteProfiles TIR domain profile. 59 225 IPR000157 GO:0007165
Tpr6g1914 1192 Gene3D - 398 482 IPR042197 -
Tpr6g1914 1192 SUPERFAMILY L domain-like 597 907 - -
Tpr6g1914 1192 Pfam Leucine Rich Repeat 651 670 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1914 Tpr-Chr6 20743835 20758077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1914 744 906 WRKY Transcription Factor Family AT4G12020 31.515 8.42e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1914 - - mtr:MTR_5g005550 1341.64