Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1906 ATGGACCTTAAATTTTTGTTTTCAACTCTCCTCATTACTCCTTTTTTTCTGATAACCTTTCATAGCAATGCTGAGACTTCCACATATATAATTCATATGAACAAATCCTTATTTCCTCAAATTTTCATGACTCATAATGATTGGTTCAAATCCACCATTCATTCCTTAAAATCAAAAACACTACTTGATGATCCTGATCAACATGCACAGAAGAAACTATTGTACACCTATGATAATGCCATGTATGGATTTAGTGCATTGTTAACTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGATAGAACAGCTACAATTGACACAACTCACACCTTTGAATTTCTCTCCCTAGATACTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGATGATATCGTTGTTGGTGTTATTGATTCCGGTGTGTGGCCTGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAAATTCCAAACAAATGGAAAGGAACCTGTCAAATTGGTCAAGAATTCAATGCTTCAATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACTATTAGCATGAATTCAGCTAGAGACAATATAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAACGGCGCTTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCTATGTACAAAGTAATTTGGCAAGAGGGCCGTTTCGCCTCGGATGTTTTGGCTGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATACTCCACTTTTTGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCAGCAGGTAATGCAGGACCTCAACTTGGAACCTTGCACAATGGTATCCCCTGGCTCATTACAGCAGCTGCAGGCACAATTGATAGAACCTTTGGTACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCAGCAAATGCTATAGTTGAAAATCTTCCACTTGTTTACAATAACACTGTCTCTTCATGCAATTCAGTGGAGCTTTTATCTCAACTTAGCAAACAAGTCATCATTCTTTGTGATGAATCAATGTCAAACTCAAACACAAACTCGGTGTTTGAACAAATCAGAGTTGTGGCAGCAACAAGTATGTTCGGGGCAGTTTTTATCTCTGATAATCCTGGTTTAATTGACACAAGATTACTTTACTCACCAAGTATTGTAATCAAGCCGCAAGATGCAGAATATGTGATCAACTATGCGAAAAGCATTAAGAATCCAACAGCCAGCATTAAATTTCAACAAACATTTGTTGGAACAAAGCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCATGGATTTTGAAACCCGACATAATGGCGCCTGGCTCTAGAGTTCTTGCAGCTTATATTCCTACTAGACCATCAGCTAGAATCGGCACAAATGTGTACTTATCAAGTGACTACACTTTCATGTCAGGAACATCTATGTCTTGTCCTCATGTTTCCGGTGTTGTTGCTCTTCTGAAATCAGCACATCCACAATGGAGTGTTGCGGCTATAAGATCGTCATTAATAACCACAGCTAGTCCTTTAGATAATACACAATATCCTATAAGGGATAATGGTTATCCTTCTCAATATGCTTCGCCTCTTGCTATTGGCGCCGGTGAAATTGATCCAAATAGAGCCATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATTTTCTTTGTGGTTTGAACTTCACAAAGAACCAAATTTTAACAATTACAAGATCAAATTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTATATAGCAACAAAACAAGATCAATGGTTCACAAGTTTAAGAGGACTGTTACTAATGTTGGTGATGGTGCTGCTACATATAGAGCTAAATTGACATATCCAAAGGGTTCTGTGGTGAAAGTGTCACCTGATATATTAAATTTCAGTTATATAAATGAGAAACGAAGTTACTACATTAATATAAAGTATGTTATGTACAAGAATGAAAATGTTTCATTTGGAGATCTTGTTTGGATTGAAGATGGTGGAACACACACGGTTAGAAGTCCTATTGTAATAGCACCTAGTGGAATTATATAA 2295 0.3669 MDLKFLFSTLLITPFFLITFHSNAETSTYIIHMNKSLFPQIFMTHNDWFKSTIHSLKSKTLLDDPDQHAQKKLLYTYDNAMYGFSALLTSNELETLKNIDGFVAAYQDRTATIDTTHTFEFLSLDTPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKIPNKWKGTCQIGQEFNASMCNFKLIGARYFNKGVIASNPNVTISMNSARDNIGHGTHTSSTVAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVIWQEGRFASDVLAGMDQAIIDGVDVISISMGFDDTPLFEDPIAIASFAAMEKGIVVSSSAGNAGPQLGTLHNGIPWLITAAAGTIDRTFGTLVLGNGQNIIGWTLFPANAIVENLPLVYNNTVSSCNSVELLSQLSKQVIILCDESMSNSNTNSVFEQIRVVAATSMFGAVFISDNPGLIDTRLLYSPSIVIKPQDAEYVINYAKSIKNPTASIKFQQTFVGTKPAPAAAHYSSRGPSHYFPWILKPDIMAPGSRVLAAYIPTRPSARIGTNVYLSSDYTFMSGTSMSCPHVSGVVALLKSAHPQWSVAAIRSSLITTASPLDNTQYPIRDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNFLCGLNFTKNQILTITRSNSYDCENPSLDLNYPSFIALYSNKTRSMVHKFKRTVTNVGDGAATYRAKLTYPKGSVVKVSPDILNFSYINEKRSYYINIKYVMYKNENVSFGDLVWIEDGGTHTVRSPIVIAPSGII* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1906 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Tpr6g1906 764 CDD Peptidases_S8_3 112 578 IPR034197 -
Tpr6g1906 764 Gene3D - 344 479 - -
Tpr6g1906 764 CDD PA_subtilisin_like 349 472 - -
Tpr6g1906 764 Gene3D - 630 760 - -
Tpr6g1906 764 Pfam Fibronectin type-III domain 657 758 IPR041469 -
Tpr6g1906 764 PANTHER OS01G0868800 PROTEIN 28 759 - -
Tpr6g1906 764 Pfam Subtilase family 137 581 IPR000209 GO:0006508|GO:0008236
Tpr6g1906 764 Pfam Peptidase inhibitor I9 28 111 IPR010259 -
Tpr6g1906 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Tpr6g1906 764 Gene3D Peptidase S8/S53 domain 139 626 IPR036852 GO:0004252|GO:0006508
Tpr6g1906 764 SUPERFAMILY Subtilisin-like 114 617 IPR036852 GO:0004252|GO:0006508
Tpr6g1906 764 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Tpr6g1906 764 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Tpr6g1906 764 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Tpr6g1906 764 ProSiteProfiles Serine proteases, subtilase domain profile. 118 613 - -
Tpr6g1906 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 759 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1906 Tpr-Chr6 20643421 20646133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1906 1 759 Subtilisin-like Serine Gene Family AT5G67360 41.730 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1906 - - var:108328904 1110.9