Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1903 ATGAGCTTCAATACCATTCATCATATTCTTAGAGCTTATGGAGCAAATATAGTTTACAATGTTGAATTGATGAATGGTATTGAAGCTCATAAACTTTTGTGTAGAAAAGCCTTCATAAGTGATTATTCATGCAGTACATTTGCAGAGCTGATTCCCGAGGTTTTAAAATATACTCAATGTCTTCCATTGGCAATTAGAGTAATAGGTTCTTTCTTGCATTCTCGAAATGCCAAGCAGTGGAAAGCTACCTTGGATAGATTGCGGAATAGTCTGCCGGACAAAATATTGAAAGTTCTTCAGGTAAGTTATGAAGGACTGGATGAGGAAGACAAAGAAATATTTCTGCACATTGCTTGTTTCTTTAAAGGAGAGAGGAAGGATTATGTGAGCCGAATTCTAGATGCTTGTGGATTGCAGCCTGATATTGGAATTCCACTTCTTGCTGAAAAATCACTCATAACCATTAAAAATGAGGAAATTCATATGCATGAAATGTTGCAAGAGTTGGGGAAGAAAATTGTTCGAGGACAACATCCAGATGAGCCAGGATTTTGGAGTAGGTTGTGGCTTTACCAGGATTTCCATTATGTGATGGTGACCGAAAAGTTGAGGGTTGAAGCTAAAGCCATAATTCTAAATCAGAAAGAGGATGACTTCAAATTTAATGAGTTGAGGGCTGAAGATTTGTCAAAAATGGAGCACTTGAAACTGCTCATATTAAATCATAAGAATTTTTCAGGAAGACCCTCATTTCTTTCTAATTTCCTACGCTATCTTTTGTGGAATGGTTACCCTTTCATTTCTTTGCCATCAAATTTTCAACCATATCACCTTGTTGAGTTGAATTTGCCTAATAGCAGCATTGAACAACTATGGACAGACATCCAGCCATTACCATATTTGAAAAGGATGGATCTGAGCAACTCTAAAAATCTCAAGATGACCCCATGCTTTAAAGGGATGCAGAATCTTGAGCGACTAGATCTTTCAGGATGCATAAGCTTATGGCATGTGCATTCATCAATTGGACTTCTTACAGAACTTCAATTCTTGAGCTTCCAGAACTGTAGCAGTCTGGCATGCTTTGATTTTGGCATTGCATCCAAGTTAAGTTCTCTGAGAGTTCTCTGTCTCTCTTGTTGCACAAAACTTGAAAATACTCCCGATTTCAGGGGATTATCAAATCTTGAGTATCTTGACATGGATCAATGTACAAGTTTATATACAATTCATAAATCTATTGGGGATCTTACAAAGCTTAGATTCTTAAGTTTGAGAGGCTGCACAAATCTTGCCAAATTACCTGACAGCTTTAACGATATGACATTTCTTATGATACTAGATTTAAGCGGCTGCTCTAAATTTACGAATCTTCCACTGGGATCTATATTCGGTTCTCAAACTCAACAATCTTTGATTTTTATCGACTTAAGCTTTTGCAATATTTCTCAAGTACCTGATGCTATTGGAGAATTAAGGGGTTTGGAGAGACTAAATTTACAGGGCAATAACTTCACTGGACTACCTTCTACCATCCAAAGACTTTCCAGTCTATCATATTTAAACTTGTCTCATTGCCACAAGCTTTGTAGTTTCCCTAAGCTCCCGATTGAAAGTGGTCAGACAGATTCAGTGGGAAGATATTTTAAAACAACGTCTGGATCCCGTGATCACAGGTCTGGATTGTATACTTTTGATTGTCCCAAGCTGAATGTATATAAACTACAGTTACATCTTGAAGTCAAAACAAGAGTGAGAATATCAGAATTATCATTTAAATGGCTAAAAAGACTAGTTGAGGAACCTCATCACTTCCAGTGTGGCTTTGACAGTGTTCTTCTTTGGTTTGATTACCTATGTAGTAGTCTTCCTCTTTGGTTTGATCACTAA 1890 0.3709 MSFNTIHHILRAYGANIVYNVELMNGIEAHKLLCRKAFISDYSCSTFAELIPEVLKYTQCLPLAIRVIGSFLHSRNAKQWKATLDRLRNSLPDKILKVLQVSYEGLDEEDKEIFLHIACFFKGERKDYVSRILDACGLQPDIGIPLLAEKSLITIKNEEIHMHEMLQELGKKIVRGQHPDEPGFWSRLWLYQDFHYVMVTEKLRVEAKAIILNQKEDDFKFNELRAEDLSKMEHLKLLILNHKNFSGRPSFLSNFLRYLLWNGYPFISLPSNFQPYHLVELNLPNSSIEQLWTDIQPLPYLKRMDLSNSKNLKMTPCFKGMQNLERLDLSGCISLWHVHSSIGLLTELQFLSFQNCSSLACFDFGIASKLSSLRVLCLSCCTKLENTPDFRGLSNLEYLDMDQCTSLYTIHKSIGDLTKLRFLSLRGCTNLAKLPDSFNDMTFLMILDLSGCSKFTNLPLGSIFGSQTQQSLIFIDLSFCNISQVPDAIGELRGLERLNLQGNNFTGLPSTIQRLSSLSYLNLSHCHKLCSFPKLPIESGQTDSVGRYFKTTSGSRDHRSGLYTFDCPKLNVYKLQLHLEVKTRVRISELSFKWLKRLVEEPHHFQCGFDSVLLWFDYLCSSLPLWFDH* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1903 629 Gene3D Ribonuclease Inhibitor 212 363 IPR032675 -
Tpr6g1903 629 PRINTS Disease resistance protein signature 58 72 - -
Tpr6g1903 629 PRINTS Disease resistance protein signature 319 335 - -
Tpr6g1903 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 117 IPR027417 -
Tpr6g1903 629 Pfam Leucine Rich Repeat 277 296 IPR011713 -
Tpr6g1903 629 SUPERFAMILY L domain-like 227 533 - -
Tpr6g1903 629 SUPERFAMILY "Winged helix" DNA-binding domain 93 196 IPR036390 -
Tpr6g1903 629 Gene3D - 24 107 IPR042197 -
Tpr6g1903 629 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 471 537 IPR044974 GO:0006952
Tpr6g1903 629 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 386 460 IPR044974 GO:0006952
Tpr6g1903 629 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 385 IPR044974 GO:0006952
Tpr6g1903 629 Gene3D Ribonuclease Inhibitor 466 600 IPR032675 -
Tpr6g1903 629 Gene3D Ribonuclease Inhibitor 368 465 IPR032675 -
Tpr6g1903 629 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 386 460 - -
Tpr6g1903 629 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 471 537 - -
Tpr6g1903 629 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 8 385 - -
Tpr6g1903 629 Pfam Leucine rich repeat 475 527 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1903 Tpr-Chr6 20620285 20623477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1903 9 489 WRKY Transcription Factor Family AT5G45050 29.865 3.36e-55 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1903 - - mtr:MTR_5g005550 733.021