Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1902 ATGGAAAAAACAAAATATTCAGATGCAATTTCAAAATTTATCCAAAGTTTAGAGCTACCGAATGTTTCTTTGGATCATGGAGGAGTTGCCACAGCTTCTACTTCTTCTGTTGATAGAATCCGAAGCAAGGGATACGATGTGTTCATCAGTTTCAGAGGCTCTGACACACGCAACACCTTTGTTGATCATCTCTACTCTCATCTCATCAGAAAAGGTATTTCCACTTTCAAAGATGACAAAGAGCTTCAGAAAGGTGAATCTATTTCACCTCAACTTTTGCAAGCAATTCAACATTCACGGCTTTCTATCGTTGTTTTCTCGAAAGATTATGCTTCATCTACTTGGTGTTTGGATGAAATGGCCGCTATTGCTGATTGCCGTGCTGAATTGAAACAAATTGTTTTTCCTGTTTTCTATGATGTTGATCCGTCTCATGTAAGAAATCAGAATGGAGTTTATGAGAATGCGTTTGTTTTACACACTAAGCAGTTTGGATATAATTTGGAGAAGGTCACTCGGTGGAGGAGAACTATGACTTGTTTGGCTAAATTAGCTGGTTGGGACGTTAGAAATAAGCAAGAGTTTTCAGAGATTGAACACATTGTTCAGACTGTAATAAAAAAACTGGGTCATAAATTCTCAAAGTTTGCTAAGGACCTTATTGGAATACAACCTCGTGTAGAAGAATTAGAAAGCCTTTTAAAACTAAACTCGAAGAAGGATGACATTCAAGTTTTGGGAGTATGGGGGATGGGTGGAATAGGGAAGACAACTCTTGCATCTGTCTTGTATGACAGAATCTCATATCAGTTTGATGCTAGCTGTTTTATTGAGAACTTTAGTGACATTTATAGAAATAGTGGTGGTAGATATGGCGGTGCTACTGCTGTGCATAAAAGAATTCTTTGTCAAACTATGGAAGAAAAAAATCTAGATGTATACAGTCCTTCTGAAATATCGGGAATTGTAATGAATAGGCTGTGTGACATAAAACTTCTTGTAGTTCTTGACGATATTGAAGAATATGAGCAACTGCTGGAATTGAATATAGACCCCAAGTCACTTCTTGCAGGAAGTAGAATAATCATAACCACTAGAGATGAGCATATTCTAAAACAGTATGATGCAGATATAATTTATAAGGCTCGATTCATGGATGAAAATGACGCTCATAAACTTTTGTGTAGAAAAGCCTTCAAAAACGATCATTCAAACAGTATTTTTCAAGAGCTGGTTCCTGAGGTACTAAAACATGCTCAGCTTCTTCCATTAGCGATTGGAGTAATGGGTTCTTTCTTGTATAGACGAGATGCTATGCAGTGGAGAGCTACCTTGGATGGATGGCAGAATAATCCGAATAGTGGTATTATGAAAGTGCTTCAGACAAGTTTTGAGGGACTAGAGCAAAGAGAGAGGGAGATATTTCTGCACATTGCTTGTTTCTTTCAAGGGGAGAGGGACGATTATGTAAGGAAAATTTTAGATGCTTGTGGATTGTACCCAAACATTGGAATTTCACTTCTTGTTGAAAAATCGTTCATAACCCTTAGAAACGAGGGAATTCATATGCATGTAATGTTGCAAGAGTTGGGGAAGCAAGTTGTTCGGGGACAACATCGTGACGAGCCAGTATTCTGGAGCAGATTGTGGCTTTACACGGATTTCCATCGTGCGATGAGGACTAAAACGGGAGAAATAGAAGTTAAAGCTATAGTTCTTGATCAAAAGGAGGATGGCTTCAGTTTTAATACGTTGAGTGCTGACAATTTATCAAAAATGCAACGACTGAAACTGCTCATATTATATCATAAGAATTTTTCAGGAAATCCTATATCACTTTCCAATTCCCTATGTTATTTTTCATGGGATGGCTATCCTTTCACTTCTCTGCCATTAGATTTTCAGCCATCTGACCTTGTTGAATTGAATATGCCTAATAGCAGAGTGGAAAAATTATGGACAGGCATCCAGTATCTCCCCTGTTTGAAAAGGATGGATCTGAGCAACTCTAAAAATCTCAGTATGACTCCAAGTTTTGAAGGGATTCAAAATCTTGAGCGGCTAGATTTTACAGGATGCATAAACTTGTTCCAGGTTGATCCGTCAATTGGACTTCTTACAAAACTTGTATTCTTGAGTTTGCAGAACTGTAGTAGCTTGTTAAGACTTGACTTCAACAGCGTATCCAGTTTAAGTTCGTTAAGAGTTCTTCGTCTCTCCGGGTGCACCAAACTTGAAAATTCTCCAGATTTTACTAGAGCATTTAATCTTGAGTACCTTGATATGGATCAATGTACAAGTTTAACCACAATTCATGAATCCATTGGGGCTCTTGTAAAGCTTAGATTTTTGAGTTTGAGATATTGCTCAAATCTTGTTGGAATACCTGACGACCTTAATAACATGGAATCGCTTACAACTCTAGATCTATATGGCTGCTCGAAATTTACCAATTTTCGCCTGAGATATTCCGATTGTTCTTCTCCCCTGGAATCTTTGATTTTTCTGGACTTAAGCTTTTGCAATATTTCTGAATTACCTGATGCTATCGGAGACTTGGGGTGTTTAGAAAGACTAAATCTTCAGGGAAATAACTTTGTTACAATTCCTTCTACCATCAATAGGCTTTTCAGACTAGCATACTTAAACTTGTCTCATTGCCACAGTCTTGAATATTTGCCTAACCTCCCAACAGAAAGTGATCCATTATTGGTTGGAAGATACTTTAAAACAACATCTGGATCCCGTGATAATAGGTCTGGAATATATGCTTTTGACTGTCCCAAGGTGGCCGAACGCTTGTTCTCGTGCAAAGAAGAGCTCCATAAAGATGTAATTGAAGACATTCAATTTGAGTGGATACAGAGACTAGTTAAGGAACCTCGTCACTTCCGGTGTGGCTTTGACATTGTTCTTCCTTGGCATTGGACAAACATGGACTGTCGTGAATATCCTGTTCCTACTCTTCCACATTGGTTCGATCACCGATTTAATGGAGGTTTAAGAGTATGGACATGTATACCCTTCTCTGATATGCATTTTGATTGGGTTGGTTTTATTTTCTGTGTAGCATTTGAGGTGAATAATTGTTCTGAAGTATCTGGTTCATCACATCAATCACCCTCGTCACCACTGCCATATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAAGAACGCTTTGATATGCCACTTAATTTGGAAGGGAATGAGATTCATGGCTCAAAGTATCTTTGGATAATCTATATCTCGCTGGAACACTGTCATTTTATAAAAACAGGAGCTCAAATCAAATTTAAAGCCCGCCAAAATTTGATTATGAAGGAATGTGGGTTGCGCCTCGTAACCAAGGAAGACATCGAGGCCTCAGAATTGAAACCGAGAACAGATCTTCCTTTAACGTTTTTTAAAATGGAAGAAACAAGCAGCAGCAGCAGCAGCTTTGAGCCAAAAATCCAACTTCCTTACAATTGGTTAGTTTCAGTTGAAGAATGTGTTGAGAATGATACAGTCAAGGGGAAAGAAATTGATCTCTTTAATCTAGGCCTTTTGACAGGAAGACCGCAGTGA 3573 0.3823 MEKTKYSDAISKFIQSLELPNVSLDHGGVATASTSSVDRIRSKGYDVFISFRGSDTRNTFVDHLYSHLIRKGISTFKDDKELQKGESISPQLLQAIQHSRLSIVVFSKDYASSTWCLDEMAAIADCRAELKQIVFPVFYDVDPSHVRNQNGVYENAFVLHTKQFGYNLEKVTRWRRTMTCLAKLAGWDVRNKQEFSEIEHIVQTVIKKLGHKFSKFAKDLIGIQPRVEELESLLKLNSKKDDIQVLGVWGMGGIGKTTLASVLYDRISYQFDASCFIENFSDIYRNSGGRYGGATAVHKRILCQTMEEKNLDVYSPSEISGIVMNRLCDIKLLVVLDDIEEYEQLLELNIDPKSLLAGSRIIITTRDEHILKQYDADIIYKARFMDENDAHKLLCRKAFKNDHSNSIFQELVPEVLKHAQLLPLAIGVMGSFLYRRDAMQWRATLDGWQNNPNSGIMKVLQTSFEGLEQREREIFLHIACFFQGERDDYVRKILDACGLYPNIGISLLVEKSFITLRNEGIHMHVMLQELGKQVVRGQHRDEPVFWSRLWLYTDFHRAMRTKTGEIEVKAIVLDQKEDGFSFNTLSADNLSKMQRLKLLILYHKNFSGNPISLSNSLCYFSWDGYPFTSLPLDFQPSDLVELNMPNSRVEKLWTGIQYLPCLKRMDLSNSKNLSMTPSFEGIQNLERLDFTGCINLFQVDPSIGLLTKLVFLSLQNCSSLLRLDFNSVSSLSSLRVLRLSGCTKLENSPDFTRAFNLEYLDMDQCTSLTTIHESIGALVKLRFLSLRYCSNLVGIPDDLNNMESLTTLDLYGCSKFTNFRLRYSDCSSPLESLIFLDLSFCNISELPDAIGDLGCLERLNLQGNNFVTIPSTINRLFRLAYLNLSHCHSLEYLPNLPTESDPLLVGRYFKTTSGSRDNRSGIYAFDCPKVAERLFSCKEELHKDVIEDIQFEWIQRLVKEPRHFRCGFDIVLPWHWTNMDCREYPVPTLPHWFDHRFNGGLRVWTCIPFSDMHFDWVGFIFCVAFEVNNCSEVSGSSHQSPSSPLPYPFYLSFESEHTEERFDMPLNLEGNEIHGSKYLWIIYISLEHCHFIKTGAQIKFKARQNLIMKECGLRLVTKEDIEASELKPRTDLPLTFFKMEETSSSSSSFEPKIQLPYNWLVSVEECVENDTVKGKEIDLFNLGLLTGRPQ* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1902 1190 Gene3D - 42 206 IPR035897 -
Tpr6g1902 1190 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 45 746 - -
Tpr6g1902 1190 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 749 817 - -
Tpr6g1902 1190 SUPERFAMILY "Winged helix" DNA-binding domain 456 557 IPR036390 -
Tpr6g1902 1190 ProSiteProfiles TIR domain profile. 43 209 IPR000157 GO:0007165
Tpr6g1902 1190 SMART till_3 44 184 IPR000157 GO:0007165
Tpr6g1902 1190 Pfam Leucine Rich Repeat 638 657 IPR011713 -
Tpr6g1902 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 749 817 IPR044974 GO:0006952
Tpr6g1902 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 746 IPR044974 GO:0006952
Tpr6g1902 1190 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 187 IPR035897 -
Tpr6g1902 1190 SMART LRR_typ_2 853 876 IPR003591 -
Tpr6g1902 1190 SMART LRR_typ_2 830 852 IPR003591 -
Tpr6g1902 1190 SUPERFAMILY L domain-like 585 895 - -
Tpr6g1902 1190 Gene3D - 385 468 IPR042197 -
Tpr6g1902 1190 Gene3D Ribonuclease Inhibitor 573 753 IPR032675 -
Tpr6g1902 1190 Pfam TIR domain 45 214 IPR000157 GO:0007165
Tpr6g1902 1190 Gene3D Ribonuclease Inhibitor 754 900 IPR032675 -
Tpr6g1902 1190 Gene3D - 207 379 IPR027417 -
Tpr6g1902 1190 PRINTS Disease resistance protein signature 245 260 - -
Tpr6g1902 1190 PRINTS Disease resistance protein signature 326 340 - -
Tpr6g1902 1190 PRINTS Disease resistance protein signature 419 433 - -
Tpr6g1902 1190 PRINTS Disease resistance protein signature 729 745 - -
Tpr6g1902 1190 Pfam NB-ARC domain 231 451 IPR002182 GO:0043531
Tpr6g1902 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 478 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1902 Tpr-Chr6 20595930 20607452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1902 729 895 WRKY Transcription Factor Family AT4G12020 38.690 2.29e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1902 - - mtr:MTR_5g005550 1392.48