Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1860 ATGGGTGGCTGTTGCAGCCACGATGTTTCTGTTCGAGGCAGAGTGGAAAGTGAGGTTGATTCTGGAGATTATGAGGATTATGAGGATATTAATGATGTCATGTATGAAAATGATGGAGCAATTGTTAGGTTAAGAGGATTTTCTAAGTCTGTATCAATGTATACTCAACAGGGTAAGAAAGGTGTTAACCAAGATTCAATGACTGTTTGGGAGGACTATACCGGAGAACAAGGCGTAATCTTTTGCGGTGTGTTCGATGGTCATGGTCCTCTAGGACACAAAGTTTCGCAATTTATCCGTGACAATCTACCCTCAAAACTATCTGAAGCAATCAAAATGGCACAACAGAAGTCGTCCATGAAATACTATGATGCCAATGATGCAGATACCGAAACTTTCCACGATGCCTACAATGATAGTAACCGCCATAACAACATATCCCTTGCTTCATGGGAAGGATGTTTTCTGAAATCCTTCGATGAAATGGATGATCATCTTGCTCAGGAAGTTAACACTGATAGCTATTGCAGTGGTTGCACAGCTGTAACTCTAATTAAACAGGGGGACCAGTTGATAGTCGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCATGAAGGATAGAGATCACCTTATTTCTGTTCAGCTTACCGTAGACTTGAAACCGGATATTCCAAGTGAAGCGTCAAGAATCTTTAACTGTGAAGGTAGAGTTTTCGCTGCAGAAGAAGAACCGGATGTATACAGAATATGGATGCCTGATGATGATTGTCCTGGACTAGCTATGTCAAGAGCCTTTGGAGACTTTTGCCTAAAAGATTATGGCCTCATTGCATCTCCAGATGTGTTTTATCGAAAAATTACCGAACAAGATGAATTTGTTGTTTTGGCAACTGATGGGATATGGGATGTGCTGACAAACGATGAAGTAGTAAACATAGTTGCATCAGCGCCAAAAAAGTCAACAGCAGCAAAATTATTAGTAAAGCGCGCGGTTAGAGCCTGGAGATACAAGTATCCCGGCTCAAAGATCGACGATTGTGCAGCTATATGCTTATTTCTTGACGATCAACCCGTTCTGTCACATTCTCAATCCATGAATATGAGAAGAAGTCGAAATCATCGCAGCAAACACTCAGGAAGCAAGCACTCAAGATCACGTAGAAAAAGTGAAGATAATGAAACTGTGGCTGGAAAAGTTGGAGTTCAATTGGATGAAGAATGGAAAGCACTTGGAGGGTTAGCTAGAGCAAATTCAATATCAAAACTTCCAAGACTTGCTAGAAATATGAGTAAAAGACAATCATCTAAACGCCTTAATGGAAGTTAA 1329 0.4078 MGGCCSHDVSVRGRVESEVDSGDYEDYEDINDVMYENDGAIVRLRGFSKSVSMYTQQGKKGVNQDSMTVWEDYTGEQGVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMAQQKSSMKYYDANDADTETFHDAYNDSNRHNNISLASWEGCFLKSFDEMDDHLAQEVNTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCMKDRDHLISVQLTVDLKPDIPSEASRIFNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIASPDVFYRKITEQDEFVVLATDGIWDVLTNDEVVNIVASAPKKSTAAKLLVKRAVRAWRYKYPGSKIDDCAAICLFLDDQPVLSHSQSMNMRRSRNHRSKHSGSKHSRSRRKSEDNETVAGKVGVQLDEEWKALGGLARANSISKLPRLARNMSKRQSSKRLNGS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1860 442 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 417 - -
Tpr6g1860 442 MobiDBLite consensus disorder prediction 368 384 - -
Tpr6g1860 442 Gene3D - 44 356 IPR036457 -
Tpr6g1860 442 CDD PP2Cc 50 354 IPR001932 -
Tpr6g1860 442 ProSiteProfiles PPM-type phosphatase domain profile. 50 354 IPR001932 -
Tpr6g1860 442 Pfam Protein phosphatase 2C 76 333 IPR001932 -
Tpr6g1860 442 MobiDBLite consensus disorder prediction 424 442 - -
Tpr6g1860 442 MobiDBLite consensus disorder prediction 363 398 - -
Tpr6g1860 442 SUPERFAMILY PP2C-like 44 356 IPR036457 -
Tpr6g1860 442 MobiDBLite consensus disorder prediction 422 442 - -
Tpr6g1860 442 SMART PP2C_4 41 352 IPR001932 -
Tpr6g1860 442 PANTHER ALPHABET, ISOFORM E-RELATED 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1860 Tpr-Chr6 20108907 20111942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1860 1 358 PP2C-type Phosphatase Gene Family AT5G01700 53.073 4.01e-132 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1860 - - mtr:MTR_7g070510 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1860 6 20108907 20111942 Tpr6g1860 6 20108907 20111942 ECH