Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1846 ATGACCATGGATGAACAACAACATCATCATCATCATCATAGTAACTGGGAAACTTCTGAACTAAATAATAATATTAATAATAATAATAATAATAATAATCATAATCATAATCATAATCATAGTCTTAATCACCTTGTTGAATTTAATGATGTTCCTAAATTCAAATCTGTTCAACCACCTTCTCTTCCTCTTTCTCAATCACCTTCTTTTCATCTACCTTTTTCATCTACTTTCAGCCCATCTGATTTTTTGATCTCACCTTTCTTTCTTTCTTCTCCAAATGTTTTTGCTTCTCCAACTACTGAGGCTTTTGCTAATCAGAGTTTTAACTGGAATAAGAACAGTTTAGAGGAAGAAGAGCAACAACAAGGTGATAAGAAAGATGTGAAAAACTACTCTGATTTCTCTTTTCCAACTCAAACAAAGCCTGAATCTGTTCTTCAATCTTCCTCAGACATGTTTCAACTGCAGGAACAAGCTAAGAAACAAAACATATGGAAATTCAATGAACCTACAAACCAAAACGATATTTTATCCGAAAGGACAGTATCGGAATCTGAATTCCAACCAACTCAGAACTTTTCCTCAGAATTGGCACTAATTAAACCAGAAACACATAATAGCTCAGTTAATGGATCTGGTTATTATAATTACAATAACAATAACTACAATAATGCATCGCAATCCGTTCGAGAACAAAGGAGGTCAGAAGATGGGTACAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCACGCAGTTATTACAAGTGCACGCATTTGAATTGCTCAATGAAGAAGAAAGTTGAGAAGGATTTGGATGGACAAATTACTGAAATTGTATATAAGGGAACTCACAATCATCCTAAGCCTCAGTCAAATAGAAGAACAAGCTCTCAACCATCTTCGTCTTGCACTAACTCCGGAATTTCTGATCAATCGGTGATGGATCATGTTTCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGAGTTTGAGCAAACATCACAGACCAGTTATTCTGGTGGAGGAAATGATGACGCAAATGGACCGGAGGCCAAAAGATGGAAGGGTGATAATGAAAATGATGTCTATTCTGCCTCGGCTAGTAGAACTGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGTGAAATCGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTTGTTAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACTGCCCATGGTTGTACAGTTCGAAAACACGTTGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACTTACGAAGGGAAACACAACCATGACGTACCAGCTGCGCGCGGTTCTGCAGGTTATAACATGAACAGAAATTCTATGAACAATGCCATCGTACCGGCGCCTATTAGGCCCTCAGCAGTGAATTGTTATTCTAATTCATCAAGTTTCACAAATTCATTTTATAACAAGACCGGGCTGCCTACAAACGGAAATCAAGAATCATTTCGACCGGACATGTTGCAGGGTAATGGAAATTTTGGATATTCATCGGCTAATCATTCACAATACTCAGATGCTGGATACTTAAAGGCCAAGGATGAGAGGAAGGATGATTCATTCCTTCAGTCATTTCTGTCAAAAGACTTCTAA 1680 0.375 MTMDEQQHHHHHHSNWETSELNNNINNNNNNNNHNHNHNHSLNHLVEFNDVPKFKSVQPPSLPLSQSPSFHLPFSSTFSPSDFLISPFFLSSPNVFASPTTEAFANQSFNWNKNSLEEEEQQQGDKKDVKNYSDFSFPTQTKPESVLQSSSDMFQLQEQAKKQNIWKFNEPTNQNDILSERTVSESEFQPTQNFSSELALIKPETHNSSVNGSGYYNYNNNNYNNASQSVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHLNCSMKKKVEKDLDGQITEIVYKGTHNHPKPQSNRRTSSQPSSSCTNSGISDQSVMDHVSIQEDSSASVGEEEFEQTSQTSYSGGGNDDANGPEAKRWKGDNENDVYSASASRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAHGCTVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSAGYNMNRNSMNNAIVPAPIRPSAVNCYSNSSSFTNSFYNKTGLPTNGNQESFRPDMLQGNGNFGYSSANHSQYSDAGYLKAKDERKDDSFLQSFLSKDF* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1846 559 Gene3D WRKY domain 221 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 Gene3D WRKY domain 380 456 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 557 IPR044810 GO:0003700
Tpr6g1846 559 MobiDBLite consensus disorder prediction 291 351 - -
Tpr6g1846 559 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 51 557 - -
Tpr6g1846 559 MobiDBLite consensus disorder prediction 288 375 - -
Tpr6g1846 559 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 SMART WRKY_cls 395 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 MobiDBLite consensus disorder prediction 225 249 - -
Tpr6g1846 559 Pfam WRKY DNA -binding domain 396 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 ProSiteProfiles WRKY domain profile. 390 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 SUPERFAMILY WRKY DNA-binding domain 387 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g1846 559 SUPERFAMILY WRKY DNA-binding domain 232 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1846 Tpr-Chr6 20003256 20006936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1846 46 555 WRKY Transcription Factor Family AT2G38470 42.883 7.55e-113 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g1846 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1846 K13424 - gmx:100776837 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1846 6 20003256 20006936 Tpr6g1846 6 20003256 20006936 ECH