Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1837 ATGGCTATCAAGGGTTTCATTCAATCAGTTTCGAATCTTATGAGGTGCTACAAGCCTACAAGAACAAAGGTTTTGAATGTTTCTGCTGAAGATAAAACAGGTGGAGTGAAGAACAATATAACTATAACAAATGATAAGGGAACGTTGAGTAAGGAAGAGATAGAGAAGATGGTGAAAGATGTAGACAGGTATAAGGCAAAGGATGAAGAGGTGAAGAGGAAACTGGAGGCGAAGAATTCCCTCGAGAATTATGCTTATAATATGAGGAATACTATTAAGGATGAGAACTTTGGTGGAAAGTTTGGTTCTGATGATAAGGAGAAGATTGAAAAGGCAGTGGAAGAGGCTATTCATTGGTCAAATCAGTTGGCTGAAGTGGATGAGTTTGAGGATAAGCAGAAGGAGTTGGAAGGAATTTGTAATCCTATTATTGCTAAGATGTATCAAGGTGGTGCTGGTGGTGATGTGCCTATAAGAGATGGTATGCCTAGTGGTGGTGCCTCTAATGGGGCAAGTTCTAGAGTTGGACCTAAGATTGAAGAGGTTGACTAA 552 0.3986 MAIKGFIQSVSNLMRCYKPTRTKVLNVSAEDKTGGVKNNITITNDKGTLSKEEIEKMVKDVDRYKAKDEEVKRKLEAKNSLENYAYNMRNTIKDENFGGKFGSDDKEKIEKAVEEAIHWSNQLAEVDEFEDKQKELEGICNPIIAKMYQGGAGGDVPIRDGMPSGGASNGASSRVGPKIEEVD* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1837 183 PANTHER HEAT SHOCK PROTEIN 70KDA 9 161 IPR013126 GO:0005524|GO:0140662
Tpr6g1837 183 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 16 64 IPR029047 -
Tpr6g1837 183 Coils Coil 54 74 - -
Tpr6g1837 183 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 76 155 IPR029048 -
Tpr6g1837 183 MobiDBLite consensus disorder prediction 155 183 - -
Tpr6g1837 183 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 21 82 IPR029047 -
Tpr6g1837 183 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 1 9 161 - -
Tpr6g1837 183 Pfam Hsp70 protein 24 149 IPR013126 GO:0005524|GO:0140662
Tpr6g1837 183 Gene3D - 72 183 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1837 Tpr-Chr6 19881346 19883869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1837 8 183 Calmodulin-binding Proteins AT1G16030 64.045 7.22e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1837 K03283 - gmx:100782173 235.728