Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g1823 | ATGGATGATGAGCAAAAAGTGGATGATGAGCAAATGGATTGGAAGCAAAAAGTGGAAGGATTGAACTATGAGTTAGGAATTGTTGAATCATCAACTTCTCAAATGGATGATGAGCAACCTAAGGTGAGTGTGAAAACCCTAGAAAAGGGTTTCCTAATCAATGTGCTTTTAGAAAAGAATAGACCTGGTATGCTTGTGTCAATACTGGAAGCTTTTGAAAATTTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTACAAGCTGTGGGATCAGGAGATAGTCACAAGGACGACAGTATCAACGAGCAAGTGGTGAAGCAAGCAGTGTTGCAAGCTATCAAGAACACGGACGACGAATAA | 378 | 0.4101 | MDDEQKVDDEQMDWKQKVEGLNYELGIVESSTSQMDDEQPKVSVKTLEKGFLINVLLEKNRPGMLVSILEAFENLGLDVLDARVSCEDTFQLQAVGSGDSHKDDSINEQVVKQAVLQAIKNTDDE* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g1823 | 125 | ProSiteProfiles | ACT domain profile. | 53 | 125 | IPR002912 | - | |
| Tpr6g1823 | 125 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 13 | 124 | - | - | |
| Tpr6g1823 | 125 | CDD | ACT_UUR-ACR-like | 59 | 119 | - | - | |
| Tpr6g1823 | 125 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 13 | 124 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g1823 | Tpr-Chr6 | 19635007 | 19638129 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g1823 | - | - | mtr:MTR_7g072470 | 182.185 |
Event-related genes