Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1815 ATGGAAAAGAAGGGAAGTGTGTTAATGCAAAGATATGAGCTGGGGAGATTATTAGGCCAAGGAACGTTTGCGAAGGTCTACCATGCTAGGAACCTTGTAACTGGCATGAATGTGGCCATTAAGGTAGTTGATAAAGAAAAGGTTTTGAAAGTCGGGATGGTTGAACAGATTAAGCGTGAAATTTCAGTGATGAGATTAGTAAGACACCCGAATGTGGTCGAGCTTTATGAGGTAATGGCGACTAAGACCAAAATTTTCATTGTCATGGAGTATGCAAAAGGTGGTGAGCTCTTCAACAAGATAGCGAAAGGAAAGCTCAAGGTCGATGTTGCTAGGAGATATTTTCAGCAGCTGATTAGTGCAGTTGACTTCTGCCACAGCAGGGGTGTGTTTCATCGAGATTTGAAACCCGAAAATCTACTATTGGATGAAAATGATAATTTGAAGGTTTCGGATTTTGGTTTGAGTACCTTTTCTGAATCTAAGTGCCAGGATGGATTACTTCACACTACATGTGGTACACCTGCGTATGTTGCTCCTGAAGTGATAAACCGAAAGGGCTATGAGGGATGCAAAGCTGATATTTGGTCGTGCGGCGTAATCTTGTTTGTTCTATTGGCTGGTTATCTTCCATTCCATGATCAAAATCTGATGGAGATGTACAGGCAAATCGGTAAAGGAGAAGTCAAATTTCCTAAATGGTTTGGACTAGAGGTTCGCCGGTTGTTGTCCAAAATATTGGATCCAAATCTGAAGACTCGCATATCAATGGCCAAGATCATGGAAAATTCTTGGTTTAAAAGGGGGTTAGAGAAGCCGATTGTTATCGATATCGAAAAAAATGACCTAGCTTCTCTGCACGCTGATGGACTGTTCGAAGTGTCCGAGAACGGAAGTGATTCTAATACGGAGTCAAAACAACAACAAGCCAAACCATGTAACAACTTAAACGCCTTTAATATCATCTCCTTCTCGTCTGGTTTTGATTTATCCAGCTTGTTCGAAGACACAATTCAAAAGAAAGAGATGCGGTTTACATCTTACAAGCCGGCTTCGATTATAATCTCCAAGTTCGAAGAAATTTGCAAGTGTCTTCACTTGAAAATTACGAAAAAAGATGGAGGTTTATTGAAGTTGGAAAGTTCAAAGGAAAGAAGGAAAGGGACTCTGAATATTGATGCCGAGATTTTCGAGATTACACCTCTCTTCCATCTTGTGGAACTTAAGAAGTCCGATGGCGATACAGTGGAGTATCAGAAGCTTTTGCATCAGGAAATTAGACCAGCACTTAAGGACATTGTGTGGAATTGGCAAGGAGAACAACCTCATGAACTCCAACATGAAGCAGTGCTGGAGGAGCAACCAACAACCATCTTTTACTGA 1383 0.4107 MEKKGSVLMQRYELGRLLGQGTFAKVYHARNLVTGMNVAIKVVDKEKVLKVGMVEQIKREISVMRLVRHPNVVELYEVMATKTKIFIVMEYAKGGELFNKIAKGKLKVDVARRYFQQLISAVDFCHSRGVFHRDLKPENLLLDENDNLKVSDFGLSTFSESKCQDGLLHTTCGTPAYVAPEVINRKGYEGCKADIWSCGVILFVLLAGYLPFHDQNLMEMYRQIGKGEVKFPKWFGLEVRRLLSKILDPNLKTRISMAKIMENSWFKRGLEKPIVIDIEKNDLASLHADGLFEVSENGSDSNTESKQQQAKPCNNLNAFNIISFSSGFDLSSLFEDTIQKKEMRFTSYKPASIIISKFEEICKCLHLKITKKDGGLLKLESSKERRKGTLNIDAEIFEITPLFHLVELKKSDGDTVEYQKLLHQEIRPALKDIVWNWQGEQPHELQHEAVLEEQPTTIFY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1815 460 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Tpr6g1815 460 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Tpr6g1815 460 Gene3D Kinase associated domain 1, KA1 311 436 - -
Tpr6g1815 460 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Tpr6g1815 460 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1815 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Tpr6g1815 460 Pfam NAF domain 314 371 IPR004041 GO:0007165
Tpr6g1815 460 CDD CIPK_C 317 431 - -
Tpr6g1815 460 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 447 - -
Tpr6g1815 460 PANTHER - 2 447 - -
Tpr6g1815 460 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Tpr6g1815 460 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1815 460 CDD STKc_SnRK3 11 265 - -
Tpr6g1815 460 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Tpr6g1815 460 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1815 Tpr-Chr6 19558539 19561958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1815 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 64.018 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr6g1815 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1815 K07198 - gmx:100803787 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1815 6 19558539 19561958 Tpr6g1815 6 19558539 19561958 ECH
Tpr6g1815 6 19558539 19561958 Tpr4g2945 4 33585245 33589283 ECH
Tpr6g1815 6 19558539 19561958 Tpr3g3631 3 40375483 40378615 ECH