Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1809 ATGGGAAATTACAGGTTCAAATTGTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACAAACACAAACAACTCAACAACAAAGGAAGAAAAAGAAATCAACAACCTCAAACACATCAAAATCAAAGCAACCCCACCAAACCAATCCAAGAAAATCTTACTACTTTACAAGAGAACTTAACCAAACAAGCAATAACAACATAATCTACAACACTTCACCTGAACAACCTAGAAAATCATCATCAAAACAACAAAGACCAAAAATAAGAACACCAAAAACATCATCATCAACATCATCTCCACTTGATAGCTTTTCAGAATCAGAATCCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCTTCCCACAAATGACATCATAATAGATGTTGACAACAATTCTTTAATTTCAACAAGAAAAGATGATAAGCTAAATGGGTATGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTGACAAAACCAGAGAATTTCAATTACTTGCTAAACTATACAAAGAAGAAACAAACAAAACCCAGAAGCAAAATTTCATCAAATGATGAACATAACGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGATGAAGAACAGAGGAACATCAACACAAACACACCAAGTAGAAGATTCTCTATGAGTTCACCAAGTGTGAAACTTAGAATCAATTCACCAAGACTTTCTAGCAAGAAAATTCAATCACATGGCCGGAAAAGCGTGTCGTCCACCACTACTAGTTCGGCCGGTAACCGGAGAAGTCTTTCGGATAGTTTGGCAATTGTGAAGTCATCCATGAATCCACAAAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAGAACAATATTAGAACATCAAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATGAACTTATCATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1029 0.3537 MGNYRFKLSDMMPNAWFYKLRDMGRTRNQTQTQTTQQQRKKKKSTTSNTSKSKQPHQTNPRKSYYFTRELNQTSNNNIIYNTSPEQPRKSSSKQQRPKIRTPKTSSSTSSPLDSFSESESPDPEIRTDRVLLPTNDIIIDVDNNSLISTRKDDKLNGYDSLSELMKLPPIVTKPENFNYLLNYTKKKQTKPRSKISSNDEHNVKGSLKVKILKDEEQRNINTNTPSRRFSMSSPSVKLRINSPRLSSKKIQSHGRKSVSSTTTSSAGNRRSLSDSLAIVKSSMNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDLTDNQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1809 342 MobiDBLite consensus disorder prediction 222 277 - -
Tpr6g1809 342 MobiDBLite consensus disorder prediction 192 221 - -
Tpr6g1809 342 MobiDBLite consensus disorder prediction 97 117 - -
Tpr6g1809 342 Pfam Transcriptional repressor, ovate 282 338 IPR006458 -
Tpr6g1809 342 MobiDBLite consensus disorder prediction 80 129 - -
Tpr6g1809 342 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Tpr6g1809 342 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 342 - -
Tpr6g1809 342 MobiDBLite consensus disorder prediction 24 63 - -
Tpr6g1809 342 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 342 IPR038933 GO:0045892
Tpr6g1809 342 MobiDBLite consensus disorder prediction 186 277 - -
Tpr6g1809 342 ProSiteProfiles OVATE domain profile. 278 337 IPR006458 -
Tpr6g1809 342 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 277 339 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1809 Tpr-Chr6 19473895 19475366 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr6g1809 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1809 - - mtr:MTR_7g072875 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1809 6 19473895 19475366 Tpr6g1809 6 19473895 19475366 ECH