Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1807 ATGTACAAGGGGAGATTTTGCACTTCAGGTGAGATTAAGGCTCCCCTTGGATATGCTGAAACTGACCCAACTGGTCGATACGGTCGATTCAAGGACATTCTTGGCAGGGGAGCTATGAAAACTGTATACAGAGCATTTGATGAGTTCCTTGGGATTGAAGTGGCTTGGAACCAAGTCAAACTTGGTGATGTTTCTCATTCACCGGATCAACTTCAACGCCTTTATTCCGAAGTTCATCTTCTTAAGAACCTCAACCATAAGTCCATGATGATCTTCTATGGTTCTTGGATCGATATCAATGGAAAAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGCACTCTTAGAGAATATAGGCAAAGGTATAACAAAGTAGATATTCGAGCATTGAAGAATTGGGCGCGCCAGATTCTAAGTGGTTTGGAGTATTTACATAACAATAATCCTCCCGTGATACATCGAGACCTCAAATGTGATAATATATTTGTCAATGGCCATAAAGGAGAGGTCAAGATTGGTGACTTAGGTCTTGCAGCTATACTTTCTAGATCCCAAGTTGCTCAAAGTGTCATAGGTACTCCGGAGTTCATGGCACCAGAACTATACGAAGAGAAATACAATGAACTTGTAGATATATATTCTTTTGGGATGTGTATGATAGAGATGTTTACACTTGATTTTCCATACAGCGAGTGCTCAAATCCAGCTCAAATATACAAGAAAGTAACCGCGGGGAAGCTACCAAATGCATTTTTCAAAATCAAAGATTTAGAAGCACAAAGGTTTGTGGGAAGATGTTTATCACATGCCTCAAAGAGACCATCAGCAAAAGAACTATTGATGGACCCATTTTTTGCCAAGGAACAACTTGAATTGTCATTGCCAAGCACAACATTATCTACAAATCAAACATTTAAGCATCTTTCTATAGGTGATCGAACAAGTAGAAATATGACAATCACTGGGTCCATAAATGAAGAGAATAACACAATTTTCCTTAAAGTGCGGATATCTGATGAAATAGGGCAAACAAGGCATATATTCTTTCCATTTGACACAAAAAAAGACACTGCTATTAAGGTGGCAATGGAGATGGTAGAAGAACTTGAAATTAGTCACTTGGATCCATTAGAGATAGCTACAATGATAGATAATGAGATTTCAACATTATTTCCAACTTGGATGGATACTCATGGTAAGTGTGAGAATCAACTACAACATAGCTTTAACTATGAAGAAGATGATGATGATGATGTTAATAACCAAAATCCTTTTGTCTTGTCATCATCTTGTCCTTCTTCACCTCATGATTCTCTCACCAAGTCTATCTCTAAGACCCACTTTTGTGGGAAGCATGGCTTGTTTCCTCAAGAATGGAATCAAGATCTATTTATTAATGATGATGGAAGCTCTCCAAGCTCAATGAATTCCTACAAGTGTTCAAATATCCAATATCATGAAGATGAGCATTGTCCAACAATAGTTGAAGAAGCCATATTCAAGCATAACAATCAAAATTGCACAAGATCATGCCAAATAGAAGAGGGAAAAACAAGTAATTTCACTAAACAATTTTTGTACCCGAAAATGGACTCCTGTGGTGGTTGTAGATGTGGTGGTGGGCATGGGTCGAGCCACCACAAATTGTCGAGGATAACAAAGAATCGTTTAAACATCGACGAACATAGGAGCTTGCAACTTCAACGATCACAATTATTGGAGGTGTACAAGAGACGGATGATCAACACAATTGCCACCATGGAGGGAATTGGATTTCAATATCCGGATGGACGTCGTACACGTTGA 1809 0.387 MYKGRFCTSGEIKAPLGYAETDPTGRYGRFKDILGRGAMKTVYRAFDEFLGIEVAWNQVKLGDVSHSPDQLQRLYSEVHLLKNLNHKSMMIFYGSWIDINGKTFNFITELFTSGTLREYRQRYNKVDIRALKNWARQILSGLEYLHNNNPPVIHRDLKCDNIFVNGHKGEVKIGDLGLAAILSRSQVAQSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMFTLDFPYSECSNPAQIYKKVTAGKLPNAFFKIKDLEAQRFVGRCLSHASKRPSAKELLMDPFFAKEQLELSLPSTTLSTNQTFKHLSIGDRTSRNMTITGSINEENNTIFLKVRISDEIGQTRHIFFPFDTKKDTAIKVAMEMVEELEISHLDPLEIATMIDNEISTLFPTWMDTHGKCENQLQHSFNYEEDDDDDVNNQNPFVLSSSCPSSPHDSLTKSISKTHFCGKHGLFPQEWNQDLFINDDGSSPSSMNSYKCSNIQYHEDEHCPTIVEEAIFKHNNQNCTRSCQIEEGKTSNFTKQFLYPKMDSCGGCRCGGGHGSSHHKLSRITKNRLNIDEHRSLQLQRSQLLEVYKRRMINTIATMEGIGFQYPDGRRTR* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1807 602 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Tpr6g1807 602 PANTHER WNK KINASE 1 598 - -
Tpr6g1807 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 598 - -
Tpr6g1807 602 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1807 602 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Tpr6g1807 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Tpr6g1807 602 CDD STKc_WNK 26 286 - -
Tpr6g1807 602 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Tpr6g1807 602 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1807 602 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1807 Tpr-Chr6 19432443 19436557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1807 16 418 MAP Kinase Kinase Kinase AT3G51630 63.373 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr6g1807 Pkinase 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1807 K08867 - gmx:100272206 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1807 6 19432443 19436557 Tpr6g1807 6 19432443 19436557 ECH