Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1785 ATGGAAAATACTGAAAATCTAGCTCATGGTCGTGGAAAAGTAATTGATGAGTTGTTAAGGGGTCGTGAATTAGCAAATCAACTTAGACATCTTCTCAATGAAAGTGGTGATATTGATCATAATAATAATGATTCAACAACACCATTTGCTGAAAATCTTTTGAAGGAAGTGCTTATGACTTTTACAAATTCACTCTTGTTCTTGAACAATAATAATCTTACTTCAGATGTTTCTGATGCTCAACTCACCAAATCTGAGGATTCTTTGGAGAGTAATTGCAAGAGTACATCCATTGTTAAGGAACGAAGAGGTTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAAGGAATCTGAACAACCAGAGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATCCTCCACAATGATTTCCCAAGGAACTACTATAGGTGCACTCACAAATATGAACAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATTCAAGAAGATCCACTTCTTCACAAAACAACCTATTATGGCCATCACACTTGTAGACTCATACAAAACCCTGAAATCATAGTAGATTCACTTTCTCCTGCTCATCACTCTTCCATGTTCCTTAGCTTTGACAACTCTTTCCCAACACCAACAAAACAAGATTGCCCTTTTCTCTCAACTTCTTCTCATCCATCATCAACATCACCATCAGTGAAAAAAGAGGAGTGCAAGGAAGAGATTGTTAATCCTCCTCCTCCTCCTCCCCCTCCTTCATCTTCCCACAATGATTACCTTTCTGGACTCACTTTCGATGATTCCGATAGACATGTGACACTATCATCAACACTTGATTCTCATGATCACCTTGGTGTCAATATTTCTGATATTTTGTATGATGATGTCCTCAATTGGCCTCTTTCTTGA 918 0.3758 MENTENLAHGRGKVIDELLRGRELANQLRHLLNESGDIDHNNNDSTTPFAENLLKEVLMTFTNSLLFLNNNNLTSDVSDAQLTKSEDSLESNCKSTSIVKERRGCYKRRKVSQTWEKESEQPEEDGHQWRKYGQKKILHNDFPRNYYRCTHKYEQGCKATKQVQKIQEDPLLHKTTYYGHHTCRLIQNPEIIVDSLSPAHHSSMFLSFDNSFPTPTKQDCPFLSTSSHPSSTSPSVKKEECKEEIVNPPPPPPPPSSSHNDYLSGLTFDDSDRHVTLSSTLDSHDHLGVNISDILYDDVLNWPLS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1785 305 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 299 IPR044810 GO:0003700
Tpr6g1785 305 MobiDBLite consensus disorder prediction 220 234 - -
Tpr6g1785 305 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 299 - -
Tpr6g1785 305 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1785 305 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g1785 305 MobiDBLite consensus disorder prediction 220 258 - -
Tpr6g1785 305 ProSiteProfiles WRKY domain profile. 118 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1785 305 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g1785 305 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1785 Tpr-Chr6 19190029 19192975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1785 13 206 WRKY Transcription Factor Family AT3G56400 38.462 2.21e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g1785 WRKY 4.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1785 - - mtr:MTR_7g073430 455.292