Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1784 ATGAGTTCTGATCAACCACTGCTTTCCGAACCAGATCTTGTTCCTCCAGTCATTCATCATCGCCACCGGAAATCCGGATCCCGCACTACCTTCTTTGAAGCTGCCGCCGCAGAATCTTTTCCCGACCACCATAGGGAAGTTGTGTTGGCGAAAGATTGCAGCTTCCACTCGGCGTTTTGCAATAATAATAACAACAGTGGCAGCATTGGCATCTCATCATCCTCTTTAACAGAGACACAAAACCCTGATTCAGAGTTTCGTTTGGAATGCCCCACGCGGGAAAGGGGACGCCTGCGATCCTGGGGTGCAATGGAACTGCATGATGCAAATACCGCGCCCTTTGAAATTTCAACAGCTTCTGCAGTAACATCAGCTCCATCTCGCAGGATTCGTCATAAAAGTCTGCAGTTTGATGAACAAATTTTACATGATGATAATGCTAGGTTGATCTATATAAATGATCCTAAGAGAACTAATGATAAGTATGAGTTTACTGGGAATGAGATCCGAACTAGTAGATATACTTTTATCACATTCTTGCCTAAGAATTTGTTTATTCAGTTTCATAGGGTTGCTTATTTGTATTTCCTTGCTATTGCTGCACTCAATCAGCTTCCTCCCTTAGCTGTATTTGGGAGGACAGTGTCCCTTTTTCCGCTTTTGTTTGTTCTTTGTGTTACTGCTATTAAGGATGGGTATGAGGATTGGAGGAGACATAGGTCCGATAACAATGAGAACAATCGTGAGTCTTTGGTTCTTCAGTCCAGTGATTTCCGTTCCAAGGTATGGAAAAAGATTCAGGCTGGTGAGGTTGTTAAGATTTTTGCAGATGAGACCATTCCTGCTGATATGGTTTTGTTGGGTACAAGTGATCCGAGTGGGCTTGCCTACATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCCAAGCAGGAAACAACTTCTGCAGTATCTTCAGAGGTTTGTGATATTGCTGGGATTATTAGATGCGAGCAGCCAAACCGGAACATTTATGAGTTCACAGCTAATATGGAGTTCAATGGAATTAAGTTTTCCCTTAGCCAGTCAAACATTGTCCTGCGAGGTTGCCAGCTCAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAGGAAACAAAAGCCATGTTGAACAGTGCGGCTTCTCCTTCCAAGAGAAGCCGACTTGAAGGTTATATGAATAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTTGCCCTTGGGATGTGTCTTTGGCTGGTACGTCACAAGAACCAACTTGATACCTTGCCTTACTACAGAAAAAGATACATCAACAAAGGCCCGCAATATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAGCGTTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTCCAGATAATGATACCCATATCTCTTTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACATGCATATGTATGACGCTAGCTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAGATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAATTCCGGAGGGCTAGCGTACATGGGGATAATTATGGGAGCTCCTTGCTTGCTGCTGATGATAGTTCAGCTGCAACAGATGTTATTCCTAAACGGAGATGGAAACTGAAATCTGAAATTTCAGTTGATCCCAAACTAATGTCCGTGTTGCATAAAAACCCAAGTAGAGATGAAAGAATAGTTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATTCCTATACTTAGTGATGGTGAATTTTCTGGTTGTGGAACAAGTGAATCACCTGGATATGTAGAGTGCATTGATTACCAGGGAGAATCCCCTGATGAACAAGCTCTAGTTTCTGCGGCTTCTGCATATGGATACACTCTTTTTGAGCGGACATCTGGACATATTGTTATTGACATCAATGGTGAGAAACTCAGATTGGATGTATTGGGCTTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCCGTTGTTATTCGGTTTCCTGACAATGTTGTAAAGGTGCTAGTCAAAGGGGCTGATACATCAATGTTTAACATTTTGGCAAACGGCAGTGAAAGCCACAATAGCTTATTGCATGCAACACAGAGCCATTTGACTGAATATTCTTCGCAAGGTTTGCGCACCCTTGTAGTTGCCTCTAGAAGTCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGGAGAGGCAAGCACTGCCTTAACTGACAGAGCTAGTAAACTACGTCAAGCGGCAGCTCTTATAGAATGCAATTTAAATCTACTTGGAGCAACCGGAATCGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAACAAGAGACTGCGATTTCAATTGGTCTTTCCTGCAAGCTTCTCAGTGCAGATATGCAGCAAATTGTTATAAATGGCACTTCAGAGGAGGAATGCAGAAATCTTTTGGGTGATGCAATAGCTAAATATGGTGTGAGATCTTCAAGTAGAGGGCATCAGAATCCGAAGAATAAAACCAATGCTGAACATGGTGATCTTGATGTTTCCAATGGTTCAAAGTCAATGAGTTTGCCCAAGTGGAATTCAGGAAAGGAAGAAGGACCTAATACTCCATTGGCACTCATAATTGACGGGAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTTGACCTCGCAACTTCCTGTAAGGTTGTGCTGTGTTGTCGTGTTGCACCCTTGCAGAAGGCTGGAATTGTTGATCTGATAAAAAGCCGAACAGATGATATGACACTAGCCATAGGTGATGGGGCCAATGATGTGTCAATGATTCAAATGGCAGATGTTGGTGTTGGAATATGCGGGCAGGAAGGACGTCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTTCAGTTCTTGAAAAGATTACTTCTTGTTCACGGGCACTGGAATTACCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTTTGGTATATATTATGCACCGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTCTATTCTGTGATATACACTTCTGTACCCACAATTTTTGTTGGTATTTTGGACAAAGACTTGAGTCATAAGACACTCTTGCAGTATCCGAAACTTTATAGTACTGGTTACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATCGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACACCGTTGTTCACCTATAAGGATAGTACAATTGATATATGGAGCATGGGTAGCTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGCACACCTGGCTATGGACATCAACCGTTGGCTATTAATTACTCATTATGCTGTCTGGGGATCCATAATCACTACATATGGTTGCATGGTGATATTGGATTCTATACCCGTCTTTCCCAATTTCTGGACTATTTATCATCTGGCAAAGTCCCCTACATATTGGATAACAATTTTGCTTATAATAATTGTGGCATTGCTACCTCGCTTTACTTGCAAAGTTGTTTGGCAAATCTTCTGGCCTTCAGATATCCAGATAGCAAGAGAAGCCGAGTTAATGAGAAGACGAAATGATCATTTGCTGTCAAGGCATCAAGGTTCCAGTTAA 3858 0.4147 MSSDQPLLSEPDLVPPVIHHRHRKSGSRTTFFEAAAAESFPDHHREVVLAKDCSFHSAFCNNNNNSGSIGISSSSLTETQNPDSEFRLECPTRERGRLRSWGAMELHDANTAPFEISTASAVTSAPSRRIRHKSLQFDEQILHDDNARLIYINDPKRTNDKYEFTGNEIRTSRYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDNNENNRESLVLQSSDFRSKVWKKIQAGEVVKIFADETIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETTSAVSSEVCDIAGIIRCEQPNRNIYEFTANMEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFIMCLVVALGMCLWLVRHKNQLDTLPYYRKRYINKGPQYGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDMHMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGDNYGSSLLAADDSSAATDVIPKRRWKLKSEISVDPKLMSVLHKNPSRDERIVAHEFFLTLAACNTVIPILSDGEFSGCGTSESPGYVECIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFNILANGSESHNSLLHATQSHLTEYSSQGLRTLVVASRSLSDAELEEWQSRYGEASTALTDRASKLRQAAALIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEEECRNLLGDAIAKYGVRSSSRGHQNPKNKTNAEHGDLDVSNGSKSMSLPKWNSGKEEGPNTPLALIIDGNSLVYILEKELESELFDLATSCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIFVGILDKDLSHKTLLQYPKLYSTGYRQEAYNMQLFWITMIDTVWQSLVLFYTPLFTYKDSTIDIWSMGSLWTIAVVILVNAHLAMDINRWLLITHYAVWGSIITTYGCMVILDSIPVFPNFWTIYHLAKSPTYWITILLIIIVALLPRFTCKVVWQIFWPSDIQIAREAELMRRRNDHLLSRHQGSS* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1784 1285 Gene3D - 803 1031 IPR023214 -
Tpr6g1784 1285 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 140 1282 - -
Tpr6g1784 1285 SUPERFAMILY Calcium ATPase, transduction domain A 248 389 IPR008250 -
Tpr6g1784 1285 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 1258 IPR023298 -
Tpr6g1784 1285 Pfam Cation transport ATPase (P-type) 654 728 - -
Tpr6g1784 1285 Pfam Phospholipid-translocating ATPase N-terminal 150 215 IPR032631 -
Tpr6g1784 1285 Pfam Phospholipid-translocating P-type ATPase C-terminal 1019 1259 IPR032630 -
Tpr6g1784 1285 MobiDBLite consensus disorder prediction 887 913 - -
Tpr6g1784 1285 SUPERFAMILY HAD-like 524 1036 IPR036412 -
Tpr6g1784 1285 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 470 566 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g1784 1285 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 961 1077 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr6g1784 1285 CDD P-type_ATPase_APLT_Dnf-like 166 1151 - -
Tpr6g1784 1285 SFLD p-type atpase 521 1042 IPR044492 -
Tpr6g1784 1285 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 164 1266 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr6g1784 1285 MobiDBLite consensus disorder prediction 1 26 - -
Tpr6g1784 1285 Gene3D - 226 392 - -
Tpr6g1784 1285 Gene3D - 647 781 IPR023299 GO:0000166
Tpr6g1784 1285 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 140 1282 - -
Tpr6g1784 1285 SFLD Haloacid Dehalogenase 521 1042 - -
Tpr6g1784 1285 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 543 820 IPR023299 GO:0000166
Tpr6g1784 1285 PRINTS P-type cation-transporting ATPase superfamily signature 537 551 - -
Tpr6g1784 1285 PRINTS P-type cation-transporting ATPase superfamily signature 991 1010 - -
Tpr6g1784 1285 ProSitePatterns E1-E2 ATPases phosphorylation site. 539 545 IPR018303 -
Tpr6g1784 1285 Pfam E1-E2 ATPase 252 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1784 Tpr-Chr6 19174922 19181694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1784 127 1268 Primary Pumps ATPases AT5G04930 57.180 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1784 K14802 - gmx:100812459 2085.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1784 6 19174922 19181694 Tpr6g1784 6 19174922 19181694 ECH