Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1783 ATGGATCCCAACAATTCTTCTAATTATCCCAACAATTCTCAAAATTCCAACAATTATCAAAACTCCAACAATTATCAAAACCCCAACAATTATCAAAATCCCAAGAATTATCAAAATTCAAATCAATTTTTCAACCAACATCCTCAAAACATACCTAATTTTGGTTTAACACCAAATTTCAACCAATCATCCTTTGTTCCAAACTTTCATCCATATTATGGATCTATGCTGAGAAATTCATCTCAAACACCCCCGTTTAATGGTTACATGCCGATGGTTAATGAAAATTTTCCGAATGGTGGTACAACTAACTTTCCCGAATTTTCAACACAAATAACTATTGCTAATGAAGATTCAACTCCTAAGAGCAAGAAAAACCAGCAACCATCATGGAACACTGAAAAAAATTTGGTGCTAATTAGTGGGTGGATCAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTCAAATTGCTGACTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAAATATTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTCTCCAAGGAAGTGGTTGGTCCGAGAATGATGTTTTGGCAAAAGCGCAGGAAATATATGCATGTGGGAAGAATGTTCGGTTCATTTTAATGGAAGAATGGAATGCTCTCCGTGATAAACCACGTTATAGTAGTCAAGTAGGATCTGGAAGTAGTGGATCTAAGAGATCTCACGAGAGTGATCTCTGGAAATGGAGAGGAAATGCTCCTACTGTTAATTTCTTTGTGAATCAGCATCCCTATGATATGACATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCTGATAAGTTATTTGCAAAATATCAGGAGGGATATCGGAAGGACATCGAACGTGCATTTGGAGTTCTTCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGTTTGTGGGACATAGCCGATTTGGGTATCATAATGAGATCATACATCATATTACATAATATGATTGTTGAGGATGAACGAGACTCATATGCTCAACGTTGGACCGATTTTGAGCAATCTGAGGAAAGTGGATCTAGTGCACCGCAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCCGAGTTCCGTGATCCAAAAGGTCATCAAGAATTGCAAGCAGATTTAGTGAAGCACATATGGACAAAGTTTGGAATGAGACGTGATTGA 1332 0.3889 MDPNNSSNYPNNSQNSNNYQNSNNYQNPNNYQNPKNYQNSNQFFNQHPQNIPNFGLTPNFNQSSFVPNFHPYYGSMLRNSSQTPPFNGYMPMVNENFPNGGTTNFPEFSTQITIANEDSTPKSKKNQQPSWNTEKNLVLISGWIKFGTSSVVGRNQKGETYWGQIADYCNEHCSFDPPRDGVACRNRFNYMNKILGKWIGAYDGAKRLQGSGWSENDVLAKAQEIYACGKNVRFILMEEWNALRDKPRYSSQVGSGSSGSKRSHESDLWKWRGNAPTVNFFVNQHPYDMTYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKYQEGYRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSYIILHNMIVEDERDSYAQRWTDFEQSEESGSSAPQPYSTEVLPAFANHVRARSEFRDPKGHQELQADLVKHIWTKFGMRRD* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1783 443 Pfam Plant transposon protein 272 377 IPR006912 -
Tpr6g1783 443 PANTHER PUTATIVE-RELATED 62 266 - -
Tpr6g1783 443 PANTHER - 62 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1783 Tpr-Chr6 19154509 19162187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1783 100 263 Glutathione S-transferase Gene Family AT5G41240 28.488 6.93e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1783 - - mtr:MTR_5g077245 341.658