Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1765 ATGTGGGTTCTAAGAGTTTATGGATATGCTTTGGCATTTTCATTTTGTTTCATCACACTCATGGCAGCTTCACAAAGAACACATCCTTCAGAAGTAAAAGCACTGGTAGACATCAAAAAGAGTTTGATTGATCCGATGGATAAACTGAGGAACTGGAATAAGGGTGATCCATGTGCAGCAAACTGGACTGGAGTTTGGTGTTTTGATAAGAAGGGTGATGATGGTTACTTCCATATCCGTGAACTCTACTTGATGACTTTGAATCTCTCGGGAACTCTAGCACCTCAGCTTGGTCTTCTCTCCCATCTTGAGATAATGGATTTCATGTGGAACAATCTGACCGGCACAATACCAAAGGAGATTGGCAACATTAAATCATTGAAACTCTTGCTTCTGAATGGAAATCAATTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTTCAAATATGAATAGACTCCAACTGGATGAAAACCAATTGTCAGGTCCTGTGCCCGAATCATTTGCCAACTTGGTCAATGTTAGACACCTCCACATGAACAACAACTCATTCAATGGTCAAATTCCACCCAAACTTTCAAACCTATCCAATCTTATGCATTTGCTTTTGGACAACAATAACTTATCTGGATATCTTCCACCAGAATTCTCGAAGTTACAAAGTTTGGCAATACTCCAACTTGATAACAATAATTTCAGCGGGAATGGAATTCCTTCTAGCTATGAAACTTTCCCTAGGCTTGTAAAACTGAGTCTAAGAAATTGCAGTCTGCAAGGACCTATTCCTAATTTGAGTTCAATACCAAGACTTACATACGTGGATCTAAGCAGGAATCAGTTCAGTGGACCTATACCATTATATAAACTTGCAGACAATATGACAACTGTTGATTTGTCCCACAACAAACTCAATGGAACAATTCCACGAGGCGTGGTATATCCTCATCTTCAAAGATTGCAACTAGAGAACAATTTACTGACTGGGTCCTTCCCTACTACCATATGGCAGAATATATCCTTCAGCAGGAAGGCGAAACTTATAATTGATATTGGTAACAACTTACTTTCTGACATTTTTGGAGATCTGAATCCCCCGGAAAATGTAACCTTAAGGCTTTCTGGAAATCCTGTTTGCAAGAATTCCAACATACAAAGAATTGGCCAATTTTGTGTTCTTGAAGGGCGTGACATAGATGAAGAATTTGCAAATTCAACCATCTGTCCCAGTCAATCTTGTCCATTCGACAATTTCTATGAATTTGCACCCTCCCAAATTCATTGTTTTTGTGCAGCACCTATAAGAATTGGATATAGGCTAAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATAAAACTCGTTTCGAATCATACATAACTGATTCCTTAAACTTAAGCATCTACCAGTTATCAATAGATTCTTATGAATGGGAAGAAGGACCTCGTCTTAGAATGAATTTAAAAATTTACCCTTCATTCAACGAATCTCACTCCAACACATTCAGCCCAAACGAGGTCCGTCGCATTAATATCATATTTTCATCATGGAGATTTCCTCGCACGGATTTTTTTGGACCATATGAACTCCTGAATGTCACTCTTCTAGGACCATATGCAAATATCATTATTAATACAGAGAGCGGAAAGAGAAAAACAGGCATACTAGTTGCTATTATAATAGCAGCTGTTGCTTGTGTTTTAGCAATATCTGCATTAATCATGCTTCTAATGTTTAGAAGAAATGTGAAATACCAGCATTTGATTTCCAGGAAGCGTATGTCCTCTAGTGTATGTATCAAAATAGATGGTGTGAAATCATTCACTTTGAAAGAGTTGACTCATGCTACCAACAAATTTGATATCTCAAGTAAAGTCGGTGAAGGAGGTTATGGAATTGTCTATAAGGGCATTTTATCTGATGAAACATTTGTTGCCGTTAAACGAGCAGGAGAAAATTCATTACAAGGACAAAAAGAGTTTTTGACTGAGATTGAGCTTTTGTCAAGGTTGCATCATCGAAATCTTGTCTCACTAACTGGCTACTGTAATGAAGACGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGAATGGATTTCTGGTAAAAGTAAAAAGTGCAAGGAAGGCCTAAGTTTTTTCATGAGATTACGGATTGCAATGGGTGCCTCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATACCACAGAGATATTAAAGCCAGTAACATACTTCTAGACTCTAACTTTACAGCTAAAGTGGCTGATTTTGGATTGTCGCGGCTTATACCATACTCAGATGAAGATGGTCATGTACCTAATTATGTGTCAACAGTTGTGAAGGGAACACCGGGTTACCTGGACCCAGAATATATGATGACTCATAAGTTAACTGATAAAAGTGACGTATACAGCCTAGGAATTGTGTTTTTGGAGCTTTTGACCGGCATGCATCCAATATCACGTGGGAAAAACATTGTCCGCGAGGTTAATCTAGCTTGTCAATCTGGCAAGATAGATTCAATTATAGACAACAGAATGGGCGAATATCCACCTGAATGCTTAGACAAGTTCTTAGCTCTGGCCCTCAGTTGCTGTGAAGACCATCCAGAAGAGAGACCATCAATGATAGATGTGGTGAGGGAATTGGAAGACATTATTGCCTTGTTACCTGAAACTGAAATTAGTTTATCAGATGTTTCCTTAGATAATTCTGGTAAAATGGCACCGCCGTCTTCATCATCATCATCTGCAACAACATCAGGATTCATTACGACAAGAAAAGACCAACAGCACATGTCTTCATATGTGTCAGGAAGTGATCTTGTCAGTGATGTCATTCCGACTATTGTTCCTCGTTGA 2886 0.3888 MWVLRVYGYALAFSFCFITLMAASQRTHPSEVKALVDIKKSLIDPMDKLRNWNKGDPCAANWTGVWCFDKKGDDGYFHIRELYLMTLNLSGTLAPQLGLLSHLEIMDFMWNNLTGTIPKEIGNIKSLKLLLLNGNQLSGSLPDELGNLSNMNRLQLDENQLSGPVPESFANLVNVRHLHMNNNSFNGQIPPKLSNLSNLMHLLLDNNNLSGYLPPEFSKLQSLAILQLDNNNFSGNGIPSSYETFPRLVKLSLRNCSLQGPIPNLSSIPRLTYVDLSRNQFSGPIPLYKLADNMTTVDLSHNKLNGTIPRGVVYPHLQRLQLENNLLTGSFPTTIWQNISFSRKAKLIIDIGNNLLSDIFGDLNPPENVTLRLSGNPVCKNSNIQRIGQFCVLEGRDIDEEFANSTICPSQSCPFDNFYEFAPSQIHCFCAAPIRIGYRLKSPSFSYFPPYKTRFESYITDSLNLSIYQLSIDSYEWEEGPRLRMNLKIYPSFNESHSNTFSPNEVRRINIIFSSWRFPRTDFFGPYELLNVTLLGPYANIIINTESGKRKTGILVAIIIAAVACVLAISALIMLLMFRRNVKYQHLISRKRMSSSVCIKIDGVKSFTLKELTHATNKFDISSKVGEGGYGIVYKGILSDETFVAVKRAGENSLQGQKEFLTEIELLSRLHHRNLVSLTGYCNEDGEQMLVYEFMPNGTLREWISGKSKKCKEGLSFFMRLRIAMGASKGILYLHTEANPPIYHRDIKASNILLDSNFTAKVADFGLSRLIPYSDEDGHVPNYVSTVVKGTPGYLDPEYMMTHKLTDKSDVYSLGIVFLELLTGMHPISRGKNIVREVNLACQSGKIDSIIDNRMGEYPPECLDKFLALALSCCEDHPEERPSMIDVVRELEDIIALLPETEISLSDVSLDNSGKMAPPSSSSSSATTSGFITTRKDQQHMSSYVSGSDLVSDVIPTIVPR* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1765 961 Pfam Protein kinase domain 621 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1765 961 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 927 - -
Tpr6g1765 961 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Tpr6g1765 961 SUPERFAMILY Protein kinase-like (PK-like) 604 913 IPR011009 -
Tpr6g1765 961 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Tpr6g1765 961 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Tpr6g1765 961 Gene3D Ribonuclease Inhibitor 287 379 IPR032675 -
Tpr6g1765 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Tpr6g1765 961 Gene3D Phosphorylase Kinase; domain 1 590 694 - -
Tpr6g1765 961 Gene3D Transferase(Phosphotransferase) domain 1 695 904 - -
Tpr6g1765 961 SUPERFAMILY L domain-like 45 395 - -
Tpr6g1765 961 ProSiteProfiles Protein kinase domain profile. 619 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1765 961 MobiDBLite consensus disorder prediction 911 930 - -
Tpr6g1765 961 SMART serkin_6 619 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1765 961 CDD STKc_IRAK 625 894 - -
Tpr6g1765 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 927 - -
Tpr6g1765 961 Gene3D Ribonuclease Inhibitor 190 286 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1765 Tpr-Chr6 19003164 19011020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1765 5 902 Receptor kinase-like Gene Family AT5G01950 59.624 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tpr6g1765 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1765 - - gmx:100815005 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1765 6 19003164 19011020 Tpr6g1765 6 19003164 19011020 ECH