Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1721 ATGGCTTCAAACCTTCACCGAAATGGCGCTCAAAGAGGAAGCGCCAAATTCGATCGTCCTCTCAAGCCTCGTCCCCGCGCTTCCTCTCCTTCACCGGGATCCGGATTTCGCCGCCCTAACTCCGCCACACGAAATGACGCCGTGCCTGGAAGAGTTCGGGTGGCTGTAAGATTGAGACCTCGGAATGCTGAAGAAGAGATGGCAGATGCCGATTTTGGTGACTGCGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGCAGAAATAATTGGGATTCAGATACCTTTGAATTTGATGAGGTGCTTACTCAATCTGCATCACAAAAGCGTGTCTATGAGGTTGTGGCTAAGCCAGTTGTTGAGAGTGTCCTTGATGGCTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACGGGAAAAACATTTACTCTTGGACAACTAGGTGAAGGAGACACCTCAAGTCGTGGAATCATGGTGCGTTCCATGGAGGATATTCTTGCCGATTTATCTCCAGCTACTGATTCTGTCACCGTCTCGTATCTGCAGCTTTACATGGAGACTCTTCAGGACTTGCTTAATCCAGCAAATGATAACATTCCAATAGTCGAAGATCCAAGAACCGGTGATGTATCTTTGCCTGGGGCAACTCTTGTAGATATCAGGGATCAGCAGAGCTTTTTGGAGTTGTTAAGAATAGGGGAAGCTAATCGTGTTGCTGCTAATACCAAAATGAACACTGAGTCTTCTCGTAGTCACGCTATGCTGACGGTACATATTAAGAGGTCTGTCGTAGAAAGCGAAGATATTGTATCTACTAGTCAAAATGGTGATGTCTCGCACTTGATTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTTGACTTAGCAGGTTCAGAGCGTGTTCATAAATCAGGAAGTGAAGGGCTCATGCTTGAGGAAGCTAAATCTATAAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTGGCAGAGAATAATGCTCACGTTCCATTTCGTGATTCGAAGCTCACCAGGATGCTCCGAGATTCTTTTGGTGGCACAGCTAGGACTTCATTGATAGTGACTATTGGTCCATCTCCACGTCATCGAGGAGAGACTTCCAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGCTTGTCACGAAAACTTGAAATACAGTTGGATAAGCTCATTGCAGAGAATGAGAGGCAGCAGAAATCTTTTGAGGATGACATTGAAAAAATAAATTTGGAGGCACAGTGTCGTATTATGGAGGCTGAGAGAAAATTTGCTAATGAATTTGAGAAAGAGAAACTGAAATGCCAGATGGAGTATATGGGAATTGTAAAGGAGCTGGAACAGAAATTGGTGTTGAATCAAGATAGACACGATTGTCATGCTGATAATGGAGAGGGGCCTGCACAATCTTCTGCAGACGAAGTTGCTGAGCTCAAAATGCTGCTCGAAACTGAAAGCAATAGAAGAAAGGCAGCTGAAGAAGAGGTGGCACGTCTAAAATGGCAACTGGAGAAATATACACAACCAGAGGAAGGAGGGTGTTTTGAGATTACAAAGCTTCACAACCTCCTGGAGGATGAAGCTCATCAGAAGAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAATCGAACTATGAAATTGAGCAGATGAGAAGATGTTTGGAAGGTGGAAGCTCAGGGAGTACATTTTCTGCAACAGATTCCTCTGTGACTCAAGTTAGGCATTCCCAATTCAAAGATGCTGCGAATGGTCAGAAGTCACCTGTTGCTACACTCTTTGAGCAAGTTGGATTACAAAAGATCTTGTCATTACTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCCGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGTGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAAGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCGATTGCCAATCTTGCCATGAATGAAGCGAATCAAGAACTTATAATGGCTGAAGGAGGAATTACTCTGCTGTCAATGGCTGCATCTGATGCCGAAGATCCCCAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAACCTATGTGGAAATGATAAAATATTGATGACTCTGAGATCTCAGGGAGGTATCAAGGCCTTACTAGGAATTGTAAGATGTGGACATCCAGATGTTCTTTCCCAAGTTGCACGAGGAATTGCCAATTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAACTGGCAGATCTATACTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCGATCAGGCGTCACATTGAGCTTGCACTTTGTCACTTGGCACAACATGAAGCAAATGCAAAAGACATGATTAGTGGAGGTGCTCTTTGGGAACTTGTCAGGATTTCAACGGATTGTTCACGAGAAGATATACGGAGTCTTGCTCATAAGACTCTCAGTTCTATCACAGCATTCAAATCTGAATTACGACGATTGCGTATAGATTATTGA 2667 0.4312 MASNLHRNGAQRGSAKFDRPLKPRPRASSPSPGSGFRRPNSATRNDAVPGRVRVAVRLRPRNAEEEMADADFGDCVELQPELKRLKLRRNNWDSDTFEFDEVLTQSASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEGDTSSRGIMVRSMEDILADLSPATDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATLVDIRDQQSFLELLRIGEANRVAANTKMNTESSRSHAMLTVHIKRSVVESEDIVSTSQNGDVSHLIKPSKPLVRKSKLVVVDLAGSERVHKSGSEGLMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEIQLDKLIAENERQQKSFEDDIEKINLEAQCRIMEAERKFANEFEKEKLKCQMEYMGIVKELEQKLVLNQDRHDCHADNGEGPAQSSADEVAELKMLLETESNRRKAAEEEVARLKWQLEKYTQPEEGGCFEITKLHNLLEDEAHQKKKLEEEIIILRSQLLQSNYEIEQMRRCLEGGSSGSTFSATDSSVTQVRHSQFKDAANGQKSPVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMAASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKTGRSILIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEANAKDMISGGALWELVRISTDCSREDIRSLAHKTLSSITAFKSELRRLRIDY* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1721 888 CDD KISc 51 392 - -
Tpr6g1721 888 Pfam Armadillo/beta-catenin-like repeat 663 700 IPR000225 GO:0005515
Tpr6g1721 888 SUPERFAMILY ARM repeat 612 882 IPR016024 -
Tpr6g1721 888 SMART arm_5 660 701 IPR000225 GO:0005515
Tpr6g1721 888 SMART arm_5 835 876 IPR000225 GO:0005515
Tpr6g1721 888 SMART arm_5 702 743 IPR000225 GO:0005515
Tpr6g1721 888 SMART arm_5 620 659 IPR000225 GO:0005515
Tpr6g1721 888 SMART arm_5 744 784 IPR000225 GO:0005515
Tpr6g1721 888 Gene3D - 721 885 IPR011989 -
Tpr6g1721 888 Coils Coil 504 531 - -
Tpr6g1721 888 SMART kinesin_4 49 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1721 888 PANTHER KINESIN-RELATED 33 880 IPR027640 GO:0003777|GO:0007018
Tpr6g1721 888 PANTHER KINESIN-LIKE PROTEIN 33 880 IPR033291 GO:0008017|GO:0032886|GO:0048364
Tpr6g1721 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 671 714 IPR000225 GO:0005515
Tpr6g1721 888 ProSitePatterns Kinesin motor domain signature. 294 305 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr6g1721 888 ProSiteProfiles Kinesin motor domain profile. 51 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1721 888 Gene3D - 612 720 IPR011989 -
Tpr6g1721 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 630 672 IPR000225 GO:0005515
Tpr6g1721 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 428 IPR027417 -
Tpr6g1721 888 Coils Coil 546 573 - -
Tpr6g1721 888 Pfam Kinesin motor domain 57 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1721 888 Coils Coil 410 441 - -
Tpr6g1721 888 MobiDBLite consensus disorder prediction 1 49 - -
Tpr6g1721 888 Gene3D Kinesin motor domain 42 424 IPR036961 -
Tpr6g1721 888 PRINTS Kinesin heavy chain signature 127 148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1721 888 PRINTS Kinesin heavy chain signature 295 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g1721 888 PRINTS Kinesin heavy chain signature 344 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1721 Tpr-Chr6 18568593 18583526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1721 50 438 Calmodulin-binding Proteins AT5G65930 34.243 3.06e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1721 - K10396 gmx:100789455 1491.09