Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1707 ATGGAGTACCAAACACTTTTGCTAGTGATTACCTTCCTAAGTGCAAGCATTCTCATCTTCATTCTTAGAAAATTAAACCAAACTCAAAATCCTACAAAGCTTCCACCAGGGCCATACCCACTTCCCATTTTAGGAAACATCTTAGAACTTGGCAAAAACCCACACAAGACCCTCACAAAACTCTCTAAAATCTATGGACCAATCATGACACTTAAACTAGGAACCATAACAACCATAGTAATCTCATCACCACAACTAACCAAACAAGTCTTACATGAAAATTCTCAAATATTTTCTAATAGAACTGTCCCACATGCAATTTGTGCAGTAGATCATAACAAATTTTCAGTTGGGTGGGTTCCAACATTAGCTTTGTGGAAGAAACTAAGAAAAATTTGTGCTACCAAAGTATTTTCTACAAAAATGTTAGACTCAACAAAAATCCTTCGCCAACAAAAATTGCATGAATTATTGGATTATGTGAATGAAAAATGTAAGAAATGTGAAGTTTTTGATATTGGTGAGGTTGTTTTTACAACTGTCCTTAATTCAATTTCAAAAACTTTGTTCTCTATGGATTTGGCTCATTCCACACCTGATGAAAAGTCTCAAGAGTTTAAAAACATTATTTGGGGTTACATGGTTGAAGCTGGTAGGCCTAATGTTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAAGGGTAAAAGCAAGGATGGCCAATCATATGAAGAAGGTGTATAAGATTTTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGATTCCAAAGCTGATTATGAGGTGTGTAATGATGTGTTAGATTCACTTCTTAATAACAACAATCTTGGAGAACCCACTTCTAAATTGAGCCACAATGAAATGGTGCATCTATTTCTGGATTTATTTGTTGCCGGGACAGATACTACATCAAGCACCATTGAATGGATTATGGCAGAGCTACTACGTAATCCTGAAAAATTAACAAAAGCAAGAAAAGAATTATGTAAAGCAATTGGCAAAGATGAAACAATTGAAGAATCACATATATCAAAGTTACCTTTCTTACAAGCAATTGTGAAGGAAACATTGAGATTGCACCCAGCTGTTCCATTATTGCTACCACACAAATGTGATGAAAATATGAACATATTAGGCTTCAATGTGCCAAAAAATGCACAAGTATTTGTCAATGTGTGGGCAATGGGAAGAGATCCAACCATTTGGGAAAATCCAACTATGTTCATGCCTGAAAGATTTTTGGAGTGTGATATTAATTATAAGGGTAATAATTTTGAGCTTATACCTTTTGGAGCTGGCAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTATGTATTTGATTGTGGCATCCCTTCTACGCAACTTTGAATGGACACTTGCTGATGGGCTAAAGCCAGAAGACATGAATATGGATGAGCAATTTGGGATAACCCTGAAGAGAATCAAAGCTCTTCGAGTTCAAGCTACTTCATCACCATAG 1515 0.3564 MEYQTLLLVITFLSASILIFILRKLNQTQNPTKLPPGPYPLPILGNILELGKNPHKTLTKLSKIYGPIMTLKLGTITTIVISSPQLTKQVLHENSQIFSNRTVPHAICAVDHNKFSVGWVPTLALWKKLRKICATKVFSTKMLDSTKILRQQKLHELLDYVNEKCKKCEVFDIGEVVFTTVLNSISKTLFSMDLAHSTPDEKSQEFKNIIWGYMVEAGRPNVSDFFPILRPLDPQRVKARMANHMKKVYKIFDGIIEERICSRDSKADYEVCNDVLDSLLNNNNLGEPTSKLSHNEMVHLFLDLFVAGTDTTSSTIEWIMAELLRNPEKLTKARKELCKAIGKDETIEESHISKLPFLQAIVKETLRLHPAVPLLLPHKCDENMNILGFNVPKNAQVFVNVWAMGRDPTIWENPTMFMPERFLECDINYKGNNFELIPFGAGKRICPGLPLAHRTMYLIVASLLRNFEWTLADGLKPEDMNMDEQFGITLKRIKALRVQATSSP* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1707 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tpr6g1707 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 503 - -
Tpr6g1707 504 Gene3D Cytochrome P450 20 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1707 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1707 Tpr-Chr6 18361270 18364630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1707 4 496 Cytochrome P450 AT2G45550 46.787 2.85e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1707 - - gmx:100809461 679.863