Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1702 ATGTTTGAAATTGTCGATGAAATTGGGTATTTGGATGTCAATAAACTCAGGATCTCTACAGAGAAGGACATTCTATCATGGGCTGTGAAGGTTCACAAATTCGGGTTTGGTTTGGAAGGTGAAGGTGAGAACATGGAGGCAGAAGAAGAGGCCGTGATTGGATTCTGGAGTGCATTTGGTTGGTTGGATGGAATGACTGTTTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGAGATTCAAGAAACCTATTTCGAGAGGAAGTACCAGTTTCCTGGAATGGTTTTAA 297 0.4074 MFEIVDEIGYLDVNKLRISTEKDILSWAVKVHKFGFGLEGEGENMEAEEEAVIGFWSAFGWLDGMTVFIALLSEYVVDTIERFKKPISRGSTSFLEWF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1702 98 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 27 86 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tpr6g1702 98 PANTHER VACUOLAR CATION/PROTON EXCHANGER 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1702 Tpr-Chr6 18298788 18301915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1702 45 81 Antiporters AT3G51860 72.973 3.09e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1702 K07300 - pvy:116129577 62.003