Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1700 ATGTCACTACTAAAAATGGTTTTACAAAAACTCACCAAATCCTTTCCTTTTCTTTGGCTTCAATTACTTCTCATCTTGATAAACATTGCTTCTTCAGTTAATGGAGTTGAGCTAAAGAATTTTTACATTGTTTTCTTGGGAGATCATTCTGTAAGCAAAGATATTACACTTGAGACTCATTTAAATGTTCTATCTTCTGTGAAGGGGAGCTATGATGAAGCCAAAGAGTCCATTGTATATAGCTACACCAAGAGCTTCAATGCATTTGCTGCAAAACTGTCAGAAGATGAAGCCAATAAGTTATCTGCCATGGATGAAGTGCTTTTGGTGTTTAAAAATCGGTATCGTAACTTACACACAACAAGATCATGGAACTTCATTGGTTTACCTCTAACTGCTAAGAGAAGATTGAAATTAGAACGTGACATAGTTGTTGGTCTTTTGGACACAGGGATCACGCCGGAGTCGAAAAGCTTCAAGGATGATGGGCTAGGTCCTCCACCAGCAAGATGGAAAGGAACTTGTGGTCACTATGCTAATTTCTCAGGCTGCAACAACAAGATCATAGGAGCCAAATATTTCAAGGCTGATGGAAACCCTGATCCATCCGACATATTATCGCCGATAGACGTTGACGGTCATGGAACTCATACAGCATCAACAGCTGCAGGAGATTTAGTTCCAAATGCAAGTCTATTTGGATTGGCCAACGGAACTTCACGTGGGGCCGTGCCATCGGCTAGGTTGGCAATTTACAAAGTCTGCTGGTCATCAACTGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCAATTTCCATAGGTGGAGGAAGTCCTGATTATGCTCATGACTCTATATCAATTGGTGCATTTCATGCTATGAGGAAAGGTATAATCACTGTTGCATCAGCTGGAAATGATGGTCCAAGTATGGGAAGTGTTTCAAATACTGCACCATGGATTGTGACAGTAGCTGCTAGTGGCATTGACAGAGCTTTCAAGAGCACTGTACAATTAGGAAGTGGAAAAAATGTTTCTGGTATAGGAATTAGTTGTTTCAATCCAAAACAGAAACAGTACCCTATTATTAATGCGATTGATGCCGCAAAAGACTCGAAAAGCAAGGAAGATGCTAAATTCTGCAACTCAGGGTCTTTACAGGCAAATAAAGTGAAGGGAAAGGTTGTTTACTGCTTAGGATCATGGGGCACTGAAGCTACTGTTAAAGAAATTGGAGGCATTGGTACTGTAATAGAATATGACAATTATCCTGATGTTGCTCAAATTTTCATTGCTCCTGCTACTGTTGTCAATCATAGCATAGGTGAAACTGTTACAAACTATATCAAATCTACAAGATCACCATCAGCAGTGATATACAAGAGCCATGAGGAAAAAGTTCCAGCTCCATTCGCTGCTACATTCTCATCTAGAGGACCAAATCCAGGATCCAAAAATGTCCTCAAGCCTGACATTGCAGCTCCTGGCATTGATATCTTGGCATCTTATACTCTTAGGAAATCACTCACCGGTTTGGATGGAGATACGCAATTTTCAGAATTTTCTCTAATATCTGGAACTTCCATGGCATGTCCTCATGTTGCTGGCGTAGCAGCGTATGTGAAATCATTCCATCCCAATTGGACTCCTGCTGCAATCAGATCTGCAATTATCACCACTGCCAAACCAATGAGCAGAAGAATTAACAATGAAGCAGAATTTGCCTATGGTTCTGGTCAACTAAACCCAACAAAAGCTCTAAATCCTGGTTTAGTCTATGACATGGATGAATTTGGTTATATCCAATTCCTATGCCATGAAGGTTACAAAGGTTCAAGTTTATCAGCACTAGTTGGTTCACCTATAAATTGCTCCTCATTACTTCCTGGATTTGGCCATGATGCTATAAACTATCCAACCATACAACTTAGCTTGGAAAGCAAGAAAGACATAAAAATTGGAGTTTTTAGAAGAACAGTCACCAATGTAGGTCCTGTTCCAGTTATCTATAATGCTACTATTAGATCACCAAAAGGAGTTGAAATTATAGTGAAGCCAAGTTTACTTTGTTTTGATAGAAAAATGCAGAAGAGAAGCTTTGAAGTAGTTGTGAAAGTTAAATCTATTGCTAGTATGGAGATTCTATCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTTAGGAGTCCTATAGTTATTTACAAGCCATAA 2247 0.3947 MSLLKMVLQKLTKSFPFLWLQLLLILINIASSVNGVELKNFYIVFLGDHSVSKDITLETHLNVLSSVKGSYDEAKESIVYSYTKSFNAFAAKLSEDEANKLSAMDEVLLVFKNRYRNLHTTRSWNFIGLPLTAKRRLKLERDIVVGLLDTGITPESKSFKDDGLGPPPARWKGTCGHYANFSGCNNKIIGAKYFKADGNPDPSDILSPIDVDGHGTHTASTAAGDLVPNASLFGLANGTSRGAVPSARLAIYKVCWSSTGCADMDILAAFEAAIHDGVDVISISIGGGSPDYAHDSISIGAFHAMRKGIITVASAGNDGPSMGSVSNTAPWIVTVAASGIDRAFKSTVQLGSGKNVSGIGISCFNPKQKQYPIINAIDAAKDSKSKEDAKFCNSGSLQANKVKGKVVYCLGSWGTEATVKEIGGIGTVIEYDNYPDVAQIFIAPATVVNHSIGETVTNYIKSTRSPSAVIYKSHEEKVPAPFAATFSSRGPNPGSKNVLKPDIAAPGIDILASYTLRKSLTGLDGDTQFSEFSLISGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSRRINNEAEFAYGSGQLNPTKALNPGLVYDMDEFGYIQFLCHEGYKGSSLSALVGSPINCSSLLPGFGHDAINYPTIQLSLESKKDIKIGVFRRTVTNVGPVPVIYNATIRSPKGVEIIVKPSLLCFDRKMQKRSFEVVVKVKSIASMEILSGSLIWRSPRYIVRSPIVIYKP* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1700 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Tpr6g1700 748 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Tpr6g1700 748 SUPERFAMILY Subtilisin-like 118 602 IPR036852 GO:0004252|GO:0006508
Tpr6g1700 748 Pfam Peptidase inhibitor I9 42 119 IPR010259 -
Tpr6g1700 748 Gene3D - 341 476 - -
Tpr6g1700 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 119 IPR037045 -
Tpr6g1700 748 CDD PA_subtilisin_like 347 470 - -
Tpr6g1700 748 CDD Peptidases_S8_3 118 572 IPR034197 -
Tpr6g1700 748 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 41 746 - -
Tpr6g1700 748 Gene3D - 615 747 - -
Tpr6g1700 748 Pfam Subtilase family 141 589 IPR000209 GO:0006508|GO:0008236
Tpr6g1700 748 Gene3D Peptidase S8/S53 domain 142 608 IPR036852 GO:0004252|GO:0006508
Tpr6g1700 748 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Tpr6g1700 748 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Tpr6g1700 748 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Tpr6g1700 748 ProSiteProfiles Serine proteases, subtilase domain profile. 123 598 - -
Tpr6g1700 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 746 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1700 Tpr-Chr6 18273343 18284003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1700 39 586 Subtilisin-like Serine Gene Family AT4G00230 66.302 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1700 - - mtr:MTR_7g075890 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1700 6 18273343 18284003 Tpr6g1700 6 18273343 18284003 ECH