Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1698 ATGGATAATAACTATGGTTCATCATCTTCACCATATCGGTATCCAAACCCTTATATGTATCCCCCTAACCCTCACCCTAACCCTAACCCTAACCCTAATCCTCATCGACCGTATCCACCTCAAGATCCATATGCACATTCTCATGCTCCTCCTTATCCATATCCTTATCTTTCTTCACATTCCTTTAACTATTCCTATCCTAGACCATACCCTCCTCATCCTCAATTAGTACCCTCAGCCCCACCCTCTTATCCTTATCCATACCATGTTCCTCAAGGAACTCATAATCCTACTCAACCTTCTCATTCACACCATGCTAGCTTATTACAACATGGATCATCTTCTAATCATTATTATTATTATCAACAAAATGCTTCTCATGAAGACCGTCCCGATGCTCATTCGCGTCATAATAGCTACTCTGGTCCTTACTGGTCAGAGACATCAAGTTCAATAGGCGGTGGTGGTGGTGGTGGTGGTGGAGTATCACAAACTAGTGGCGGTGGTGGTGATAATTCAAGGCCATCTGTTTATCCGCGTTTGGAGGATCTAATGAACGATGTTAGGTTGTCTGATAATCAGCCAGCTTCACCTTCGGCGCCAGCTCAACCTTTTATGCATTCGATTTCGGTACCGAAGATGCAACAGAAGAAGGAGGATTTTTATGGATATTCTAATAACTCGTTCTCGGGTTGGGGATCCTCGTACCCGAATCGGGTTAACTCGGGTAGATTTTCAGATTTTTCTGGTTCTGGCTCGTTTAATGACTCGATGTATAATCAGAGCTTGCAGGTTGTTCCGGTGCAGAATAAAGGGTCGTTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCGAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTAATAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGCATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCCGTAATTGGGAGGACTTTTGTAATTAGCAACTCTGAAAATCCTGTTTGGAGTCAACATTTTTATGTTCCTGTTGCACATAACGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATATTGTGGGTTCACAGCTCATTGGTATTGTAGCGATTCCAGTGGAACAAATATACTCAGGGGAAATAGTTGAAGGAGCTTACCCTGTCCTGAATAGTAATGGGAAACCTTGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGAAACTAAGCTTTTATCACCAAGGAGTTGGAGCAGGGCCTGAATATATCGGAGTTCCTGCCACTTATTTTCCTTTAAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGAATCCTCCCTAATGTGGTTCTTGATAGTGGGATGTTTTATGTGAATGGAAAATGTTGGCATGACATCTTTGATGCCATAAGTCAAGCTCGCCGCTTGATTTATATTACAGGTTGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGAGATGGCGGTTATGCATCAGATTATACCTTGGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCAACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTAATGGCAACTCATGATGAGGAAACTAGACGGTTTTTCAAGCACTCATCAGTCCATGTACTGCTTTGTCCCCGCATTGCTGGAAAACGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATACACACATCATCAGAAAACTGTAATTGTGGATGCGGATGCCGGAAATAACAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTATGTGATGGGCGATATGATACTCCCCACCACCCTATCTTTAAGACATTACAGACAATACATAAGGATGATTATCACAACCCCACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTCTTAACTAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACCGCATGGGATAAAGAAGTTGAAAATTTCATATGATGACGCTTTACTTAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGAAAATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGAACCAAAAGGTGCTGCCACGCAAAGGATTCTCTTCTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGCCTTGGTAATCGGGAGGCTATAAATCTTTATGAAAATGTCAATGTGTCAGGAAATCCTCCCCAAGCAAATAGTCCACAAGCAAATTGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAGTGGGATCCGCAAACATTAACCAAAGGTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAAACGTCTTGTCCACATGGACAGATCCATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTGAAGAAAGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAGGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGCAAATGAAGTAACAGAGATGAGAGGGCATCTACTAAAATACCCTGTAGATGTAGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCAGGAAGAGTTCCCTGATGTAGGAGGAAAAATTGTCGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTAA 3285 0.411 MDNNYGSSSSPYRYPNPYMYPPNPHPNPNPNPNPHRPYPPQDPYAHSHAPPYPYPYLSSHSFNYSYPRPYPPHPQLVPSAPPSYPYPYHVPQGTHNPTQPSHSHHASLLQHGSSSNHYYYYQQNASHEDRPDAHSRHNSYSGPYWSETSSSIGGGGGGGGGVSQTSGGGGDNSRPSVYPRLEDLMNDVRLSDNQPASPSAPAQPFMHSISVPKMQQKKEDFYGYSNNSFSGWGSSYPNRVNSGRFSDFSGSGSFNDSMYNQSLQVVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFNKLPGSVSNKIEGTMHKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFVVKDSDIVGSQLIGIVAIPVEQIYSGEIVEGAYPVLNSNGKPCKQGAVLSLSIQYIPMEKLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGILPNVVLDSGMFYVNGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDGGYASDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPIFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGENDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGEPKGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINLYENVNVSGNPPQANSPQANCRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKTSCPHGQIHGYRMSLWAEHTGTIEESFLQPESLECVRRVRAIGEMNWKQFAANEVTEMRGHLLKYPVDVDRKGKVRSLPGQEEFPDVGGKIVGSFLAMKENLTI* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1698 1094 MobiDBLite consensus disorder prediction 125 144 - -
Tpr6g1698 1094 MobiDBLite consensus disorder prediction 15 50 - -
Tpr6g1698 1094 MobiDBLite consensus disorder prediction 152 173 - -
Tpr6g1698 1094 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 641 IPR001736 GO:0003824
Tpr6g1698 1094 Pfam Phospholipase D C terminal 1014 1084 IPR024632 -
Tpr6g1698 1094 Gene3D C2 domain 276 417 IPR035892 -
Tpr6g1698 1094 Pfam C2 domain 281 407 IPR000008 -
Tpr6g1698 1094 ProSiteProfiles C2 domain profile. 259 405 IPR000008 -
Tpr6g1698 1094 SMART C2_3c 282 404 IPR000008 -
Tpr6g1698 1094 Gene3D Endonuclease Chain A 486 720 - -
Tpr6g1698 1094 SMART pld_4 940 967 IPR001736 GO:0003824
Tpr6g1698 1094 SMART pld_4 606 641 IPR001736 GO:0003824
Tpr6g1698 1094 CDD C2_plant_PLD 276 428 - -
Tpr6g1698 1094 PANTHER PHOSPHOLIPASE D ALPHA 1 177 1094 - -
Tpr6g1698 1094 MobiDBLite consensus disorder prediction 1 50 - -
Tpr6g1698 1094 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 279 429 IPR035892 -
Tpr6g1698 1094 PANTHER PHOSPHOLIPASE D 177 1094 IPR015679 -
Tpr6g1698 1094 SUPERFAMILY Phospholipase D/nuclease 452 706 - -
Tpr6g1698 1094 SUPERFAMILY Phospholipase D/nuclease 786 1026 - -
Tpr6g1698 1094 Gene3D Endonuclease Chain A 752 989 - -
Tpr6g1698 1094 Pfam Phospholipase D Active site motif 941 967 IPR001736 GO:0003824
Tpr6g1698 1094 Pfam Phospholipase D Active site motif 607 641 IPR001736 GO:0003824
Tpr6g1698 1094 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 940 967 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1698 Tpr-Chr6 18244404 18251116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1698 165 1094 Phospholipase D Gene Family (Wang group) AT2G42010 73.306 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1698 K01115 - gmx:100801286 1791.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1698 6 18244404 18251116 Tpr6g1698 6 18244404 18251116 ECH