Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1658 ATGACAAAGAGGTCTCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGCCATGCTCGCTTTACTCGGAAGTTGATCGCTGATAAGAGGCACAACAACAAGCATGCTCTTGGTGCTGTACTTACCAAGAACAAATTTGAGGCATTGAGCAATTTGGATGAAGAATATCAAGGCAATATGGACAGAGGAGAGAGTAAGAGACTAACGGTGACTACCGATGCTGACAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGACCAGGATGAAATAAAGGATCAAGGTAATGTTGTTGAATCGACACGAACCGAATTAGGGTCTGAAGATTCGCTGAAGACAGATTCCAAAAGAAAAAGAAAATCACGAAAGAAAAGCCGAGATATGGACAGCAATGATTTGAGTGCAACTTTGAAATCTGAAGTCACACATAATCAGCATTCAAATCAACAATCAAGAGATAATATAGATTTGGACAAGATTATGGAAGATTTTTGTCAAATTGAACGTGCTTGTTCCTTGATGCATGATGACGATGATAGCAAAGTTCTTGCTCAATCAAACCAAAAGAATATCAATTCTGAAGAACTTGCAAGAGATGCAATTCATGATTTTGTGAATCAGATGATATTGAATGGGAAAGATATGGTAGAAGATAAAAAATTCCTTTGCTCTCACGAACTCATGGAAACACTTCAGGTTATAAGCTCGGATAAGGAATTGTTTCTAAAACTTCTACAAGATCCAAATTCCCACTTACTGCGATATATTCAGGAGTTGGAAAATGCTCAAGGGAGAAGTGAAAAAGAATACAATTCTGTTGCTGATTCCAACTTCTCCGAACAAGACCTTGGCAATCTAAAACAAACTCGAGATATTGTCAACCGCAAGCATCATAAATTTTTCTGGAAAAAGGTAAAGTCTCAATCAAAAGTTCCAACAAATAAAAATGTGAAAACTGAGGTTCCAAATAGAATTGTCATTCTGAAACCTGCACCAACAAAAATGCAAAATTCAGAAAGTGAAAACAATGTTGTTTCGTCGCTTGATTCTCGTGATATTGTCCATTACAAAGATCCTTCTGTGAGAGTTGGTTCACCTTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGCATGGAAACCACAAACTCCCTGCTGAACGTCAAAACAATGACTCGAGAGGCAAAGCCATTTGTAAAGATAAAACTGGAATGAAATCTCCTAATAAGGATCATTTTTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTGTAAAAGGAACCAAGACTGGTATAAATGAAAGTGGTTCTTCGAAGGAAAAAGTTTCGAACTTATACATCGAGGCTAAGAAACATTTATCTGAGATGCTGGTAGATAATGGAGATGATAACACAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGAGCATAATTTTTTGACTACACATGCAAGATTATCCACTTCAGATAAAACTTGGGAGGTTAATGAGGATAGCTTGTCTCCCAAGCAAGACACCTATATTGAACAACCCTATCAGGAAACAAACAATTCAAGGAACCAATCAAGCGTTTGTGACAAAAGATCTAATGAAGTACCAGAAATTGAGTCAGACTCAACTCTCTCACATGATCCTGATCACGTTGATACTGCTGAAATCAGTTATCCTGTTAGAGACGAGATAGTTGCGGAAGGTAATTTAGAATTCACAAAAGATATTATTGTTTTGGAATCTTCCTCAGATCCAAACTGCTGTACTGCAGGGAAGGACCAAAATCATGATGTCTCAAAAATTGCTGTTGATGCTATATGTTCTGAATGTTTGAATGGGGATTTAAAAGAGAACCAACAATCATCTCCACTATCTTCCCCTTCTCACTCTTCCATCACTGAGAAAATGGAAGAGCTAGAAAGTTGTACAGATTTATCTGGTCGACCAAGTCCAGTATCTGTGCTCGATATACCGTTCTCCGATGATGACCCTGGCTACTCCACATGTCAGCCTGTTAAATTATGCATACAATCGCTACAAATTCGATTTGAGGAACAAGACTGTTCATCGTTGGATCGATTTCATAGAAGAAAATCTTGTCTGGAAGAAAATGAATTGATATATGACTACATAAATGCTGTCTTCCACGCCGCTAGCTTGACACAAGATCAACTATTGATGAAATGTCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCAAACATGCTTTGCCACGAACAGAAGCTCCTATTCGACTGTATCAACGAGGTTCTCATGGAGGTTTGTTGGAATTACTTTGGGGTTTCACCTTGGGTATCATTTGTAAATCCGAGTATAAGGCCAACTCCAAATATGAAGAAGATTATTCTCAAGGTCTGGGAAGGAGTGTGTTGGCATGTCCTTCCTTTACCCCCACCGCATACTTTGGAACAAATTGTTAGGAAAGACATGGCAAGAAATGGAACATGGATGGACCTTCGACTCGATGCTGAAACAGTTGGTTTTGAAATGGGTGATGTCATTCTTGTAGAGCTGATGGAAGATGCAATATTGAGCTTTGTGAATCAAAGTACAGAAAGTTAA 2733 0.3816 MTKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRKLIADKRHNNKHALGAVLTKNKFEALSNLDEEYQGNMDRGESKRLTVTTDADKLSVKKLIEEEMFIDQDEIKDQGNVVESTRTELGSEDSLKTDSKRKRKSRKKSRDMDSNDLSATLKSEVTHNQHSNQQSRDNIDLDKIMEDFCQIERACSLMHDDDDSKVLAQSNQKNINSEELARDAIHDFVNQMILNGKDMVEDKKFLCSHELMETLQVISSDKELFLKLLQDPNSHLLRYIQELENAQGRSEKEYNSVADSNFSEQDLGNLKQTRDIVNRKHHKFFWKKVKSQSKVPTNKNVKTEVPNRIVILKPAPTKMQNSESENNVVSSLDSRDIVHYKDPSVRVGSPFSLTEIKRKLKHAIGKEKHGNHKLPAERQNNDSRGKAICKDKTGMKSPNKDHFFIEKIARPMFDVVKGTKTGINESGSSKEKVSNLYIEAKKHLSEMLVDNGDDNTSISSRQIPKTLGRILSLPEYNFSPLGSPGGNLEHNFLTTHARLSTSDKTWEVNEDSLSPKQDTYIEQPYQETNNSRNQSSVCDKRSNEVPEIESDSTLSHDPDHVDTAEISYPVRDEIVAEGNLEFTKDIIVLESSSDPNCCTAGKDQNHDVSKIAVDAICSECLNGDLKENQQSSPLSSPSHSSITEKMEELESCTDLSGRPSPVSVLDIPFSDDDPGYSTCQPVKLCIQSLQIRFEEQDCSSLDRFHRRKSCLEENELIYDYINAVFHAASLTQDQLLMKCLSSDKILDPSLFDQVEFFSNMLCHEQKLLFDCINEVLMEVCWNYFGVSPWVSFVNPSIRPTPNMKKIILKVWEGVCWHVLPLPPPHTLEQIVRKDMARNGTWMDLRLDAETVGFEMGDVILVELMEDAILSFVNQSTES* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1658 910 MobiDBLite consensus disorder prediction 150 167 - -
Tpr6g1658 910 PANTHER (, RELATED) 1 907 - -
Tpr6g1658 910 Pfam Protein of unknown function (DUF3741) 222 266 IPR022212 -
Tpr6g1658 910 MobiDBLite consensus disorder prediction 574 589 - -
Tpr6g1658 910 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 907 - -
Tpr6g1658 910 MobiDBLite consensus disorder prediction 538 589 - -
Tpr6g1658 910 MobiDBLite consensus disorder prediction 113 171 - -
Tpr6g1658 910 Pfam Domain of unknown function (DUF4378) 751 898 IPR025486 -
Tpr6g1658 910 MobiDBLite consensus disorder prediction 544 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1658 Tpr-Chr6 17890017 17896146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1658 1 886 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.853 3.09e-109 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1658 - - gmx:100783243 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1658 6 17890017 17896146 Tpr6g1658 6 17890017 17896146 ECH