LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g1631	ATGTCGATCTTCGACGGAGCTTTCATCAACACACAGCTCTCCAAACACACATCGATCTTCGGTCTCCGTTTATGGGTTGTAATCGGAATCTTAATCGGCGTTGTAATCGTCTTCATCCTCTTCTTAATCTCCCTTTGTGTAGTTTCTCGCCGGCGCCACCGCCGTACCGACGACTACAAAATCACCGGAGCTACTCCAGCTAAAGAAATCCAAGAGATCGTGCATATTCCAGGACCCCACATGCTCCGGCGACCAGCTCCGGCGAAAGTACCGGAGATCCACGTGGATATTGGAAGACAAGAACACCGTGTGGTTGTTAAGTCAGATAGGGTTTCAAGTGGTGAGAGTAAAGGAACAGTTGGAAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGTAGTGTTGGTGGAATTGGACCTGAAGTATCACATCTTGGATGGGGAAGATGGTATACTTTGAGAGAGCTTGAAGATGCTACTGGTGGATTGTGTCCAGAGAATGTTCTTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTGTTCTCACTGATGGTACTAAAGTTGCTGTCAAAAATCTCTTGAATAACAAGGGCCAAGCTGAAAAAGAATTCAAAGTCGAGGTAGAAGCAATTGGTCGAGTACGGCACAAAAATCTTGTTAGGTTGCTTGGATATTGTGTTGAAGGGGCCTACAGGTACTTATATTTTTTTTCTTCTTATAAACAAAAGAAAAATAAATCGAGGCTACAAATTTTGTTTGTTTTGAATTTAGATTTAAGATTAGGATTATGTATAGTATTATTGTTTTGCAGGATGCTTGTGTATGAATATGTGGACAATGGCAATTTAGAACAGTGGTTGCATGGGGATGTTGGACCTGTTAGCCCTTTGACATGGGAAATACGCATGAACGTTATATTAGGAACAGCAAGAGGATTGGCCTATCTTCACGAAGGTCTTGAACCTAAGGTTGTTCACCGAGATGTGAAATCAAGCAACATCCTCCTCGATCGCCAATGGAACTCCAAGGTTTCTGATTTCGGGCTTGCCAAGCTTTTGAATTCTGAGAATAGTTATGTCACGACTCGAGTAATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACGGGAATGCTTACCGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAGACTATGGTTGGTAATCGAAAAGCTGAGGAAGTAGTCGATCCTAAGCTACCTGAGATGCCATCTTCAAAGGCTCTCAAACGTGCTCTATTAATTGCTCTTCGGTGTGTTGATCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTCATTCACATGCTCGAGGCAGACGACCTGTTATTCCATAATGATCGCAAAACTGGAGGAGAGTCTTCGCGATCCCTTCATGATTTTCAACAAGAGCACGAGGACTCAAATTTGGATAAGAGAACAGATGAAGGTATAAGTGTTGAAACTGAACATGGTAGTGCTAGAAATAATTATCAGTCTACTAGGGGGAGATGA	1602	0.427	MSIFDGAFINTQLSKHTSIFGLRLWVVIGILIGVVIVFILFLISLCVVSRRRHRRTDDYKITGATPAKEIQEIVHIPGPHMLRRPAPAKVPEIHVDIGRQEHRVVVKSDRVSSGESKGTVGSGCETTSSFGSGSVGGIGPEVSHLGWGRWYTLRELEDATGGLCPENVLGEGGYGIVYHGVLTDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRYLYFFSSYKQKKNKSRLQILFVLNLDLRLGLCIVLLFCRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMNVILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLNSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGEVNLIEWLKTMVGNRKAEEVVDPKLPEMPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNDRKTGGESSRSLHDFQQEHEDSNLDKRTDEGISVETEHGSARNNYQSTRGR*	534

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g1631	533	MobiDBLite	consensus disorder prediction	519	533	-	-
	Tpr6g1631	533	PANTHER	OS01G0323000 PROTEIN	257	525	-	-
	Tpr6g1631	533	PANTHER	OS01G0323000 PROTEIN	1	236	-	-
	Tpr6g1631	533	SUPERFAMILY	Protein kinase-like (PK-like)	142	474	IPR011009	-
	Tpr6g1631	533	ProSiteProfiles	Protein kinase domain profile.	163	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g1631	533	MobiDBLite	consensus disorder prediction	486	533	-	-
	Tpr6g1631	533	MobiDBLite	consensus disorder prediction	486	518	-	-
	Tpr6g1631	533	Pfam	Protein tyrosine and serine/threonine kinase	167	233	IPR001245	GO:0004672\|GO:0006468
	Tpr6g1631	533	Pfam	Protein kinase domain	272	471	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g1631	533	ProSitePatterns	Protein kinases ATP-binding region signature.	169	191	IPR017441	GO:0005524
	Tpr6g1631	533	Gene3D	Transferase(Phosphotransferase) domain 1	278	487	-	-
	Tpr6g1631	533	CDD	STKc_IRAK	169	474	-	-
	Tpr6g1631	533	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	324	336	IPR008271	GO:0004672\|GO:0006468
	Tpr6g1631	533	SMART	serkin_6	163	480	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g1631	533	PANTHER	BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE	1	236	-	-
	Tpr6g1631	533	PANTHER	BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE	257	525	-	-
	Tpr6g1631	533	Gene3D	Phosphorylase Kinase; domain 1	140	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g1631	Tpr-Chr6	17545496	17549735	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g1631	132	516	Receptor kinase-like Gene Family	AT4G02010	39.594	2.54e-87	282

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Tpr6g1631		Pkinase	1.3e-31	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g1631	-		-	gmx:100817295	754.207