Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g1611 | ATGGCTGCGGTTCAGGCGAATAGGGATATGGAAGATAAGTGCCAAGTTGAAGTTGGCATTGACGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCGACGCCACTGCCATCTATCTTAAAGATGATATCTTCAGGGAACTAATCAGGCTTATTAAGGAGAATAATAACAATATGAATGAGAACATCATGACGCAAGTTGTTGACCAAATGGAGAAAGGTTTTTTGGAGTCTGCTGGAAGAAATGTTTTTGTTAGTTCAGGTTGTTTGATTACCGCCAATGTTGGAGACTCGCGCGCTGTACTGGGTTCTATGAAGGGCGTTGGTAAACTTAAAAGATTGGCTGTTAAACAGATTGTTAAAGATCACAATATTGATCATCGAGAAGTTCAATCAGCAATCAGGGACTTGCAGCCAGATTTTCGTGATATAGATTACAATATTAATTATCGTACCTTTATAGGACTTGCCAATAAAGGTGTATTCGAGACAACTAGATGTATAGGATATGCATATTTGAAGGAGGAGATCAATGAAAGTGAATCATTTGAAATCCCGAGTTGGGAAAGAGTGCCTGGAAATTTTACGAGACCTTTGCTAACATCACAACCACATGTTTATTCAAGAATCTTAAGCGACTCTGATAAATTCATTATATTTGGATCTAGTGGATTTTACCACAAGAGGGAATCGCAGAAAGACTTGTCACAATTGTTTTACAGAAAGGGGCTAATATGA | 738 | 0.3835 | MAAVQANRDMEDKCQVEVGIDALFVGIYDGHKGDATAIYLKDDIFRELIRLIKENNNNMNENIMTQVVDQMEKGFLESAGRNVFVSSGCLITANVGDSRAVLGSMKGVGKLKRLAVKQIVKDHNIDHREVQSAIRDLQPDFRDIDYNINYRTFIGLANKGVFETTRCIGYAYLKEEINESESFEIPSWERVPGNFTRPLLTSQPHVYSRILSDSDKFIIFGSSGFYHKRESQKDLSQLFYRKGLI* | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g1611 | 245 | SUPERFAMILY | PP2C-like | 7 | 232 | IPR036457 | - | |
| Tpr6g1611 | 245 | SMART | PP2C_4 | 1 | 245 | IPR001932 | - | |
| Tpr6g1611 | 245 | CDD | PP2Cc | 2 | 226 | IPR001932 | - | |
| Tpr6g1611 | 245 | Gene3D | - | 1 | 233 | IPR036457 | - | |
| Tpr6g1611 | 245 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 227 | - | - | |
| Tpr6g1611 | 245 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 3 | 227 | - | - | |
| Tpr6g1611 | 245 | Pfam | Protein phosphatase 2C | 23 | 232 | IPR001932 | - | |
| Tpr6g1611 | 245 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 245 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g1611 | Tpr-Chr6 | 17280878 | 17281899 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr6g1611 | 1 | 233 | PP2C-type Phosphatase Gene Family | AT5G06750 | 35.178 | 1.08e-39 | 139 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g1611 | K01102 | - | gmx:100778238 | 140.584 |