Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1610 ATGTTTCAGTGGCTTACAAATTTACTATGTGCTTGCACAACCAACACAAGCAAAAACACCGTCGACATTAATGAATTTGATGAAGATCCTTTAGGGTGGTCGCGGGACCTGCTAGAACATCGATTGGGCGAATTCTCCATGGCTGCGGTTAAGGCAAATGATGTTATGGAGGACCACAGCCAGTTTGATGTTGGCAAGAAAGCACTCTTTGTTGGAATTTATGATGGCCAAAATGGTGCTGAGGCTTCCAACTTCTTGATTACTAATCTCTTTGAGAATCTAATGAGGATTATTCAGGAGAATATTCTGAGGCAAGTTGTTGATGAAATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAGCAGCCAGAGCTAGCTCTAGTAGGTTCAAGTTGTCTGTTTTGTATCGTATGGAGAGGGAGGCTATATATCGCTAACGTTGGAGACTCTCGTGCTGTAATTGGTTCTTTGGATCCATTTGATAGACTCAATGTTCGGCAGTTGGTCGAAGATCACAATGCTCGTAACAGGCATATTAAAAAAGAACTCAAGAAGTTGCATCCAAAAGATCCGACTATTGTGACGTATAATTTTGACGCATGGCGTGTTGGAGGCATAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACTGTTCACTTTAACCTCATCCTTTGCTATCAGCAGAACCTGCAATATCTTCAAGAGTCTTAAATGA 738 0.4133 MFQWLTNLLCACTTNTSKNTVDINEFDEDPLGWSRDLLEHRLGEFSMAAVKANDVMEDHSQFDVGKKALFVGIYDGQNGAEASNFLITNLFENLMRIIQENILRQVVDEMEELFMTDVEEGNQQQPELALVGSSCLFCIVWRGRLYIANVGDSRAVIGSLDPFDRLNVRQLVEDHNARNRHIKKELKKLHPKDPTIVTYNFDAWRVGGISEVSRCIGNAYLKRALFTLTSSFAISRTCNIFKSLK* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1610 245 SUPERFAMILY PP2C-like 43 231 IPR036457 -
Tpr6g1610 245 Pfam Protein phosphatase 2C 63 223 IPR001932 -
Tpr6g1610 245 ProSiteProfiles PPM-type phosphatase domain profile. 41 245 IPR001932 -
Tpr6g1610 245 SMART PP2C_4 37 241 IPR001932 -
Tpr6g1610 245 CDD PP2Cc 53 225 IPR001932 -
Tpr6g1610 245 Gene3D - 16 240 IPR036457 -
Tpr6g1610 245 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 224 - -
Tpr6g1610 245 PANTHER ALPHABET, ISOFORM E-RELATED 12 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1610 Tpr-Chr6 17277564 17279710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1610 31 232 PP2C-type Phosphatase Gene Family AT5G06750 46.698 2.07e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1610 K01102 - gmx:100806476 207.223