Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1606 ATGGGAGCTGGTGGCCGTACCTCTGTTCCTCCTTCGGCCAGGAAGTCAGAGAATGACATTGTGAAGCGGGTGCCATTTGAAAAACCTCCATTTAGTCTCAGCCAGATCAAGAAGGCCATTCCACCTCACTGTTTTAAGCGCTCTGTGATCCATTCATTCTCCTATGTCGTGTATGACCTCACCATAGCCTTCTTACTCTATTACGTTGCCACCCATTACTTCCAGCATCTTCCGAGCCCTTTCTCTTTCTTGGCCTGGCCTGCCTATTGGGCTATTCAAGGTTGCATCCTTACCGGTGTTTGGGTTATTGCACATGAATGTGGCCACCATGCATTCAGTGACTATCAGTGGCTTGATGATACAGTTGGCCTTATCCTCCACTCTGCTCTTCTAGTCCCTTACTTTTCGTGGAAATACAGCCATCGCCGTCACCATTCCAACACTGGTTCTCTTGACCGGGATGAAGTTTTTGTGCCCAAGCAGAAATCCAGCATCTACTGGTACTCCAAATACCTTAGCAACAACCCACTAGGCAGAGTCCTCACAATTACTATCACCCTCACTCTTGGCTGGCCCCTTTACTTGGCTCTCAATGTTTCTGGCAGGCCATATGATAGGTTTGCCTGTCATTTTGACCCATATGGTCCCATTTACTCAGATCGTGAACGGCTTCAAATATATGTATCAGATGCAGGAATACTTGCAGTATGCTATGGACTTTACCTTCTTGCCATGACCAAAGGGCTTGCCTGGGTTGTGTGTGTTTATGGAGTTCCATTGCTCATAGTCAATGGGTTCTTGGTGTTGATTACATTTTTGCAGCATACTCATCCTGCATTGCCACATTACGACTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTAGCAACTGTGGACAGGGATTATGGAATCCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTGGCACATCACTTATTCTCCACAATGCCACATTATCATGCAATGGAGGCTACCAAGGCAATCAAACCAATTTTGGGAGACTACTATCGGTTGGATGAAACACCATTTTACAAGGCATTATGGAGAGAAGCAAGAGAGTGTGTCTATGTTGAGCCGGATCAAGGTACCGAGAAAAAAGGTGTATTCTGGTACAACAATAAGTGGTGA 1155 0.4597 MGAGGRTSVPPSARKSENDIVKRVPFEKPPFSLSQIKKAIPPHCFKRSVIHSFSYVVYDLTIAFLLYYVATHYFQHLPSPFSFLAWPAYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLILHSALLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKSSIYWYSKYLSNNPLGRVLTITITLTLGWPLYLALNVSGRPYDRFACHFDPYGPIYSDRERLQIYVSDAGILAVCYGLYLLAMTKGLAWVVCVYGVPLLIVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYRLDETPFYKALWREARECVYVEPDQGTEKKGVFWYNNKW* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1606 384 CDD Delta12-FADS-like 47 330 - -
Tpr6g1606 384 Pfam Domain of unknown function (DUF3474) 27 65 IPR021863 GO:0016717
Tpr6g1606 384 Pfam Fatty acid desaturase 85 346 IPR005804 GO:0006629
Tpr6g1606 384 PANTHER OLEATE HYDROXYLASE FAH12 1 384 - -
Tpr6g1606 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1606 Tpr-Chr6 17246142 17251995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1606 1 383 Lipid Metabolism Gene Families AT3G12120 77.807 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1606 K10256 - gmx:547815 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1606 6 17246142 17251995 Tpr6g1606 6 17246142 17251995 ECH
Tpr6g1606 6 17246142 17251995 Tpr1g4523 1 53570643 53574512 PCT