Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1601 ATGGTGAAACGCGAATTGAATATTCCTATTCACAATGACGCTTTTGATGATAACTCCGACGACGACGTTGATTATGAATCTGTTCACGGCCGACGAAATCTCCGTTCTCGCTACCTCGCCGTCAAGAACTTGATTAACGGTGATGAAAGGGAGAATATTGCAAAAACTGACTCTGAAGTATTCGGTTCGATCATCGGTGAAATTGAGAACTTACACCAGTCAGTCACAACAACGAGAGAACAAGTAGCTGATGCACAGGCTCTTCTGGACATAACCAAATCCTTGGGTGTGTCTGTGAAAGCTCATTCTAGTGGTGGACTCACTCCTTCAGCCTTTGTCACTCACATTCTTGAAAAATTCGGACAACGAGGTGGAAAACGTACTAGCAGAGAAGATTGCAGCAGAAACTCAATAGCTTGGAATGACATTGGAGTTGCAGTTTCAAGTGTTTTTGGAAGGGGATATGGCTGTTCTACAGTGATTGGCCCAATGGATGCTAAATTAAAGCAGAGGAGGGTTTACCGAAAAAGGAGTCTGAAGCCCACTGAATTGGCACGGCCAGAACAGCTTGTTGAAGGTTCAAAGAATGAGAGAAATGATACTGATAAAAATATGTTAACTATGTTTAACATCTTAAGGAAGAATAGGCTTGTCAAGCTTGAAAATTTGGTTTTGAATAGGAACTCTTTTGCACAAACGGTGGAGAACTTATTTACTTTATCTTTTTTAGTCAAAGATGGGCGAGCTGAAATAAAAGTGGACAAGGCTGGATGTCACCTAGTTTCGCCTAGGAATGCTCCTGCTGCAAAATCAGTTACTTCTAAGGATGTTGCTTTGAGCCACTTTGTATTCCGACTTGACTATAATGATTGGAAGATTATGGTTCGCTCTGTTGTTGGGGAGGAATTGATGCCAAATAGGAATAGTCAATCACAGATTTAG 942 0.414 MVKRELNIPIHNDAFDDNSDDDVDYESVHGRRNLRSRYLAVKNLINGDERENIAKTDSEVFGSIIGEIENLHQSVTTTREQVADAQALLDITKSLGVSVKAHSSGGLTPSAFVTHILEKFGQRGGKRTSREDCSRNSIAWNDIGVAVSSVFGRGYGCSTVIGPMDAKLKQRRVYRKRSLKPTELARPEQLVEGSKNERNDTDKNMLTMFNILRKNRLVKLENLVLNRNSFAQTVENLFTLSFLVKDGRAEIKVDKAGCHLVSPRNAPAAKSVTSKDVALSHFVFRLDYNDWKIMVRSVVGEELMPNRNSQSQI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1601 313 Pfam Nse4 C-terminal 218 298 IPR014854 -
Tpr6g1601 313 PANTHER UNCHARACTERIZED 2 312 IPR027786 GO:0005634|GO:0006281|GO:0030915
Tpr6g1601 313 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 2 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1601 Tpr-Chr6 17204100 17208031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1601 28 309 Non-SMC Element family AT1G51130 51.761 1.88e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1601 K22825 - gmx:100781485 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1601 6 17204100 17208031 Tpr6g1601 6 17204100 17208031 ECH