Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1596 ATGGCTACATGTTATCAACATACATCACAAAAGTTTAAGGTAACAGAACCAACAACCATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCTTACATGGGAATTAACAACCTAGTTAAGGTTGTTGGATCAGAACAAGTCATGAGTTTTGAGCCAATCAAATCATCCTGTAACAACATTGTGACACCTTATGAAGGTTTTGGTGCAGTAACTGTAGCTAAAATCAAAAGTCCTGTTGGTTTTCAAGGTGGAGAATATTATGATGAGGATCAGATTGAAGTTCCTGATTGGTGTTTTGATCAGTTTCCAAAGATAACAGATCCTCCATTGTTGAATTGTCAAGGTTCTGGAGATAACTTCACAAGCTCTTTGTATTCAGTTTCAAAAGAATCTTTGTTGTCTAATAGTGCAGATAGTCAAAATTCTTCTGAAGATGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGATCATTTTCCTCAAAATCATGATGAATTGCTGAAGAATGATGCTTCCATAGATGAAAAGCCCTTTGAAATTTCATTTCAGAGAATTAAGTCGGGCTCACCTACAAAGTCTCCTCAACTTTATGGAATTGGATGTGCCACTTCTAGCAACAATGATTCTAGAAAATCGAAAAGAAGGATAAGATGGACTGAGGAACTGCATGAATCATTCATGATGATCGTTGATCACCTCGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCGAATTCGCTGTCACTTTCTCATGTTAAAAGTCATTTACAGGTAAAATTATTTCCATTTAATTTGAACAATTTCAATGAGTTTTGTAAACATTGTTGTCTTCGGCCTCTAATATATCTTTCTAATGTATTTGCCTTGCAGAAATGTCGATCTTCAGAACGCGTGCATAAAGCTTTGCGAGAAAGATCTGGGGAAGGACATAGAACAGATAAAGTCACAGAACTTCAACTCAAAATCTATATGCAAATTGAGGAATCGCGACAATTGCAACTAGAGGTTCGAAAAAGTATTTCCCAACAGCTTGAGATGCAAAGAAGTTTGGAAACACTGATTGAAGAACATAGCAAGAAGCTCAAAGTAATGCAAAAAGAAAAAACCAACAAAAGAAAATCTTGGACACAACGAGAAATGACAGTTCCGAAATAA 1188 0.3569 MATCYQHTSQKFKVTEPTTMYQHWSRMYGTQWESYMGINNLVKVVGSEQVMSFEPIKSSCNNIVTPYEGFGAVTVAKIKSPVGFQGGEYYDEDQIEVPDWCFDQFPKITDPPLLNCQGSGDNFTSSLYSVSKESLLSNSADSQNSSEDEYSNFQSGNMSFYDHFPQNHDELLKNDASIDEKPFEISFQRIKSGSPTKSPQLYGIGCATSSNNDSRKSKRRIRWTEELHESFMMIVDHLGGPEKAKPKAILDMMKSNSLSLSHVKSHLQVKLFPFNLNNFNEFCKHCCLRPLIYLSNVFALQKCRSSERVHKALRERSGEGHRTDKVTELQLKIYMQIEESRQLQLEVRKSISQQLEMQRSLETLIEEHSKKLKVMQKEKTNKRKSWTQREMTVPK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1596 395 Coils Coil 358 385 - -
Tpr6g1596 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 300 395 IPR044848 GO:0003700
Tpr6g1596 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 36 268 IPR044848 GO:0003700
Tpr6g1596 395 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 269 IPR006447 GO:0003677
Tpr6g1596 395 SUPERFAMILY Homeodomain-like 216 269 IPR009057 -
Tpr6g1596 395 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 36 268 - -
Tpr6g1596 395 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 300 395 - -
Tpr6g1596 395 MobiDBLite consensus disorder prediction 375 389 - -
Tpr6g1596 395 MobiDBLite consensus disorder prediction 375 395 - -
Tpr6g1596 395 Gene3D - 217 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1596 Tpr-Chr6 17152005 17154659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1596 100 375 G2-like Transcription Factor Family AT4G28610 30.389 3.55e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr6g1596 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1596 - - mtr:MTR_7g093010 509.605