Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1592 ATGTTTCAGTGGCTTACAAATTTACTATGTGCTTGCACAACCAACACAAGCAAAAACACCGTCGACATTAATGAATTTGATGAAGATCCTTTAGGGTGGTCGCGGGACCTGCTAGAACATCGATTGGGCGAATTCTCCATGGCTGCGGTTAAGGCAAATGATGTTATGGAGGACCACAGCCAGCTTGATGTTGGCAAGAAAGCACTCTTTGTTGGAATTTATGATGGCCAAAATGGTGCTGAGGCATCCAACTTCTTGATTACTAATCTCTTTGAGAATCTAATGAGGATTATTCAGGAAAATAATAATAATGTATCTGAAAATATTCTGAGGCAAGTTGTTGCTGAAATGGAGGAATTGTTTATTACTGATGTTGAAGAGGGTAATCAACAACAGCCAGAGCTAGCTCTAGTAGGTTCAAGTTGTCTGTTTTGTATCGTATGGAGAGGGAGGCTATATATCGCTAACGTTGGAGACTCTCGTGCTGTAATGGGGTCTTTGGATCCATTTGATAGACTCAATGTTCGGCAGTTGGTCGAAGATCACAATGCTCGTAACAGGCATATTAAAAAAGAACTCAAGAAGTTGCATCCAAAAGATCCGACTATTGTGTCGTATAATTTTGACGCATGGCGTGTTGGAGGCATAAGTGAAGTAAGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACCGTTCACTTTAACCTCACCCTTTCGAGTCCCACAGTCGGAACTTGCACCTTCTGATTTTACCCAACCTTTGCTATCAGCAGAACCTGCAATATCTTCAAGAGTCTTAAATGACGTTGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGTCAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGCGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTACAGATTGCAGCTAGAAGAAATAATATGAGCTATAGTGAGCTTTCGAAGATTCCTACGGGACATGGTGTTATTAGGGGTCCTAGTGTTTCTGTTGAAGGGACTAGGCGGGCTTATCATGATGATATCTCTGTGATTGTTGTATTCTTCGACAAAAAGCCGGAACTGAATCCGACTGTGATGCCAGTGGTGACCTCGATGCCAGGAATTGATTCCTTCAGAGGCTTCGATGACTCGATTCATCCATCACCTTTTAGATATCTTGATGATGTCTCTGAAGCACATCAATACCTTGAGACGATTGTCTGA 1239 0.4173 MFQWLTNLLCACTTNTSKNTVDINEFDEDPLGWSRDLLEHRLGEFSMAAVKANDVMEDHSQLDVGKKALFVGIYDGQNGAEASNFLITNLFENLMRIIQENNNNVSENILRQVVAEMEELFITDVEEGNQQQPELALVGSSCLFCIVWRGRLYIANVGDSRAVMGSLDPFDRLNVRQLVEDHNARNRHIKKELKKLHPKDPTIVSYNFDAWRVGGISEVSRCIGNAYLKRAPFTLTSPFRVPQSELAPSDFTQPLLSAEPAISSRVLNDVDKFIIFGSGGLWKLLSNWQAAEIVHTNPRDGIAKRILMTALQIAARRNNMSYSELSKIPTGHGVIRGPSVSVEGTRRAYHDDISVIVVFFDKKPELNPTVMPVVTSMPGIDSFRGFDDSIHPSPFRYLDDVSEAHQYLETIV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1592 412 PANTHER ALPHABET, ISOFORM E-RELATED 12 371 - -
Tpr6g1592 412 CDD PP2Cc 53 360 IPR001932 -
Tpr6g1592 412 ProSiteProfiles PPM-type phosphatase domain profile. 41 360 IPR001932 -
Tpr6g1592 412 SMART PP2C_4 37 358 IPR001932 -
Tpr6g1592 412 Pfam Protein phosphatase 2C 64 314 IPR001932 -
Tpr6g1592 412 Gene3D - 17 365 IPR036457 -
Tpr6g1592 412 SUPERFAMILY PP2C-like 43 362 IPR036457 -
Tpr6g1592 412 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 12 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1592 Tpr-Chr6 17144041 17149169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1592 31 395 PP2C-type Phosphatase Gene Family AT5G06750 43.360 8.56e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1592 K01102 - pvy:116121639 323.168