Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1591 ATGCTTCCATTTGTAAAACATGTTCTTTTTGGGACCCCTTATCAACAGTATGGTCAAATTGAAGACCCTCAGGCATTTGCTAATGACCCTCTGGCGTGGTCGAGGCCACTGGTTAGGTATTACTCTGGCGAATTCTCCATGGCTGCGGTTCAGGCGAATAGGGATATGGAAGATCAGAGCCAAGTTGAAGTTGGCTTTGATGCACTCTTTGTTGGAATTTATGATGGCCATAAAGGCGACGCCACTGCCATCTATCTTAAAGATCATATCTTCAGGGAACTAATCAGGCTTATTAAGGAGAATAATAACAATATGAATAAGAACATTATGACGCAAGTTGTTGACCAAATGGAGAAAGGTTTTATGGAGTCTGCTGGAAGAAATGTTTTTGTCAGTTCAGGTTGTTTAATTTGTTTCATACGGAGAGGGACGTTATATGCCGCCAATGTTGGAGACTCGCGCGCTGTACTGGGTTCTATGAAGGGCGTTGGTAAACTTAAAAGATTGGTTGTTAAACAGATTGTTAAAGATCACAATCTTGATCATCGAGAAGTTCAATCAGCAATCAGGGACTTGCAGCCAGATTTTCGTGATATAGATTACAATATTAATTTTCGAACCTGTATGATGATTGCAGAAAAAGGTTTAATCGAGACAACTAGATGTATAGGATATGCATATTTGAAGGAGGAGATCAATGAAAGTGAATCATTTGAAATCCCGAGTTGGGAAAGAGTGCCTGGAAATTTTACAAGACCTTTGCTAACATCACAACCACATGTTTATTCAAGAATCTTAAGGGACTCTGATAAATTCATTATATTTGGATCTAGTGGATTTTGGAAAGGGATATCAAATGAGGATGCTGCTAAAGTTGTTAACACCAGTCCACGAGAGGGAATCGCAGAAAGGCTTGCCACACTTGTTTTACAGAAAGGGGCTAAACACGGGAGAAGAACATATAGTCAACTTATAGGGTTGCCTAAGAGTGATCAAATTAGTGGGTCGGACACACGCAGAGAAAATTATTTTCTATTTAGATCGGCTTATCATTTAGATACAACTGTAGTTGTTGTATATTTGGACAACAACAGGTCAAATAGGGCGGGTATGATGCTAGAGATGAACTCCTATAGAGGCTGCGATGACGGATTTCAACAATCAGAGTTTACAAATTTTTATAGTAATGCTAATGCGTGA 1200 0.3942 MLPFVKHVLFGTPYQQYGQIEDPQAFANDPLAWSRPLVRYYSGEFSMAAVQANRDMEDQSQVEVGFDALFVGIYDGHKGDATAIYLKDHIFRELIRLIKENNNNMNKNIMTQVVDQMEKGFMESAGRNVFVSSGCLICFIRRGTLYAANVGDSRAVLGSMKGVGKLKRLVVKQIVKDHNLDHREVQSAIRDLQPDFRDIDYNINFRTCMMIAEKGLIETTRCIGYAYLKEEINESESFEIPSWERVPGNFTRPLLTSQPHVYSRILRDSDKFIIFGSSGFWKGISNEDAAKVVNTSPREGIAERLATLVLQKGAKHGRRTYSQLIGLPKSDQISGSDTRRENYFLFRSAYHLDTTVVVVYLDNNRSNRAGMMLEMNSYRGCDDGFQQSEFTNFYSNANA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1591 399 PANTHER ALPHABET, ISOFORM E-RELATED 24 337 - -
Tpr6g1591 399 SMART PP2C_4 31 359 IPR001932 -
Tpr6g1591 399 CDD PP2Cc 45 315 IPR001932 -
Tpr6g1591 399 SUPERFAMILY PP2C-like 38 363 IPR036457 -
Tpr6g1591 399 Pfam Protein phosphatase 2C 70 316 IPR001932 -
Tpr6g1591 399 ProSiteProfiles PPM-type phosphatase domain profile. 41 361 IPR001932 -
Tpr6g1591 399 Gene3D - 38 369 IPR036457 -
Tpr6g1591 399 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 24 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1591 Tpr-Chr6 17141168 17142846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1591 31 395 PP2C-type Phosphatase Gene Family AT5G06750 36.170 3.21e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1591 K01102 - fve:101314199 229.18