Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1586 ATGATTCGCAGCTTCCTTTACGTGGTTCTCAATCTCGTTGTCTTCTTGTCAATTTTCATTTCTCAGAGCTTGGCGTTAACTCGTTCACCCGAAGTTTGGGCTCTACAAGATCTATACAGGTCCTTGAACTACTCAGAGGCGCTTCGAGGATGGAATGGTAGTGATCCTTGTGAGGAGTCTTGGACAGGTGTTGCTTGTTCTGGATCATCGGTTATTCAACTAAAAATTCAAGGGTTAAACCTCACTGGGAGTCTGTGCAGGCTTTATAATCTACGAAATTTGAAGCTGCTTGATGTCAGTTCTAATAACATAGTGGGCGAATTACCATTTGGTTTACCCCCCAATGTCACTCATATGAATTTAAGCCACAATTTCTTAATTGGACCCATTGGTGACATATTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTGTCGGGAGATCTACCAAGATCATTTGGTTCCTTGACAAACCTTGCTAGATTGTTCTTGCAGAATAACACATTCACTGGATCAGTCACCTACCTGTCTGAACTTCCACTTACAGATTTGAACATTCAAGATAATCTGTTCAGTGGCCTTCTTCCACATCATTTTTCGTACATAAAAAATTTATGGATTGGTGGGAATAAATTCCATGCAACGGACAACTCTCCTCCATGGACTTCTCCTGTAGAGACATTTTCAGTGGAGCATAATATTAGTCCCCCACGCCCACCCACAACTAATACAAATGCCATCAAGAACTATGCTCCTCCCAAAGTAAGTGAGCACAAGCATAAGAAGAAACAATTAGGTCCTGGAGGAATTGCTTTTATGGTTGGTGGAGGAACACTAGTGGCTACAGGTATCGGACTCCTTGTTGCAATCCATTTGAACAAACTGCGTGCTCAAAGCCAGAACTTGAATCACTCTGAAAGCAATGACATCTCTTTGCATTCTCATCCAACCAGTGCAAGCATAGTGGTCTCTTCTTCTGAACTAGATGACGTGCCACTACTCCCACCTGTCGACGTTGCACCTCTTTTGGGTCCAATGAGATTTCTGTACCCGCGCCATAACAATGTGGAGGAAGCATCGAGAAGAAGTTTTTCCAAAAGAGTCAGATCCAATGGAAGGACAAAAATCTATACCATAGGGGAGCTTCAGCTAGCTACTAACTACTTCAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGTCCTGTTTACAAAGCTAAATTTCCTGATGGCAAAATTTTGGCCGTAAAGATCATAAACATGGCGGGTTTGTCTTATAGAGAAGAGGAAAAGTTCTTGGATGTCATTTGCACGGCTTCCAAATTGAAGCACCCCAACATCATACAACTCAATGGTTACTGTTTAGAACACGGAGAGCATCTTCTTGTTTATGATTACTTTGGAAATCTAACTCTATACGATGCTCTTCATGGTGGAGCATGTGAACCACTATCGTGGGTCCAACGTCTTCAGATTGCTCTAGCTGTTGCTCAGGCTCTGGACTACTTGCACTCGGCATGCTGCCCTCCTGTGGCCCATGGTAACTTGAAGGCAGCCAATGTTCTACTGGATGAAAATTTGATGCCTCATATTTGTGACAGTAGCTTGGCTATTTTGAGACCACTGGTGAAGAGCAATCAAGTTAAAATTCCAGCTACTGAGACTACAATTGCAGAGAGAGGCTATATTCCACCTGACCATGGCCAGACAGGATTCAGCAGAAGGAGAGATGTCTTTGCCTTTGGGGTATTGCTTATGGAATTGTTAACAGGAAGGAAACCTTTCGATGGTGCCAGACCAAGGGAGGAGCAATATCTGGTGAAATGGGCTTCCCCTAGGCTTTGTGAAAGCACGAGTTTGGAAAAGATAGTGGATCCCAGTATGAAAACAACATTTTCATCCAAGGTTCTTTCTCATTATGCTGATATCATCTACCTCTGTATACAGCCTTCGAAACAACACCGTCCCTCAATGTCTGAAGTTGTGAGCTCTCTTATATCTTTTTCCCAAAACTTCAACTTTGCAAAGAGCGGTGTAGCAGATGCTACTGAACTTTTAGAGAAGTCTTTCCGTTCAGCCAACACAGGCTTCATAAGTTCGCCAACAGCGAGCCACCTATCAGCCTGA 2142 0.4304 MIRSFLYVVLNLVVFLSIFISQSLALTRSPEVWALQDLYRSLNYSEALRGWNGSDPCEESWTGVACSGSSVIQLKIQGLNLTGSLCRLYNLRNLKLLDVSSNNIVGELPFGLPPNVTHMNLSHNFLIGPIGDIFTGLDNLKEMDLSYNNLSGDLPRSFGSLTNLARLFLQNNTFTGSVTYLSELPLTDLNIQDNLFSGLLPHHFSYIKNLWIGGNKFHATDNSPPWTSPVETFSVEHNISPPRPPTTNTNAIKNYAPPKVSEHKHKKKQLGPGGIAFMVGGGTLVATGIGLLVAIHLNKLRAQSQNLNHSESNDISLHSHPTSASIVVSSSELDDVPLLPPVDVAPLLGPMRFLYPRHNNVEEASRRSFSKRVRSNGRTKIYTIGELQLATNYFNEGNLLGEGSLGPVYKAKFPDGKILAVKIINMAGLSYREEEKFLDVICTASKLKHPNIIQLNGYCLEHGEHLLVYDYFGNLTLYDALHGGACEPLSWVQRLQIALAVAQALDYLHSACCPPVAHGNLKAANVLLDENLMPHICDSSLAILRPLVKSNQVKIPATETTIAERGYIPPDHGQTGFSRRRDVFAFGVLLMELLTGRKPFDGARPREEQYLVKWASPRLCESTSLEKIVDPSMKTTFSSKVLSHYADIIYLCIQPSKQHRPSMSEVVSSLISFSQNFNFAKSGVADATELLEKSFRSANTGFISSPTASHLSA* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1586 713 SUPERFAMILY L domain-like 47 217 - -
Tpr6g1586 713 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Tpr6g1586 713 SUPERFAMILY Protein kinase-like (PK-like) 370 670 IPR011009 -
Tpr6g1586 713 Gene3D Phosphorylase Kinase; domain 1 357 471 - -
Tpr6g1586 713 PANTHER OS01G0253100 PROTEIN 2 713 IPR045271 GO:0004714|GO:0006468
Tpr6g1586 713 Gene3D Transferase(Phosphotransferase) domain 1 473 693 - -
Tpr6g1586 713 ProSiteProfiles Protein kinase domain profile. 394 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1586 713 Gene3D Ribonuclease Inhibitor 28 250 IPR032675 -
Tpr6g1586 713 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 713 - -
Tpr6g1586 713 Pfam Protein kinase domain 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1586 713 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1586 Tpr-Chr6 17114099 17119465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1586 31 713 Strubbelig Receptor Gene Family AT5G06820 50.000 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr6g1586 Pkinase 3.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1586 - - gmx:100775254 941.799