Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1575 ATGGCTGCTTCAAGTGTTAAAAATCTCAACCAAACCACTACTCAATTAGAACCACTCCCACCACAACATCATCAAAATCATCACTTTCATCATCAACAACATCAACAACAACAACAACAACATCATCAAAATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACTCTCTGTCCCAGGAAGCAGCTACATAAATAATAAAGATTCAGGAGCTTATGATTTGGGTGAATTGGATCAAGCACTTTTTTTGTATCTTAATGGACAAACTGACCCAACTAGTGTTCATGAACAAAAACAGAATTCATCATCATCAGGAATGAGGCCTCCAACTCTTAACATTTTTCCTTCTCAACCTATGTACGTAGAGCCATCATCATCAAATTCTAAGGCTAGCATGGAGTTAATTTCTTCGGAAACAAGTGGATCGAAGAGAGGATCAGAGGCGCCGTCTATGGAGTTAACCAATTCAAGAAAAGAAATTGCTTCTGGCTCTCAGCAACCCAAACCTGTTAAGCAACGAGAGAGGAATAATCATGGCAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTAAGAAAAAAGGCATATATTCAACAACTAGAGTCAAGCAGAATCAAACTTAATCAGATGGAACAAGAGCTTCAGCGTGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATTTTGGGTGGTGAACAAGGTCTTCCTATTTCAATGAATGGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGCAAGGTGGTTAGAGGAGCACCACCGTTTAGTGTGTGAACTAAGAGCTGCAATTCAAGAGCACATTCATGAGAATGATCTAAGAATTTTTGTGGACAAATTCTTGCAACAAATTGATCAAGTATTGCATCTAAAAAGCTTAGTTGCAAAATCAGACATATTTCATCTTGTTTCTGGTATGTGGGTTACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAAACCTTCTGAACTCATTAAGATTATTGTGAGTCAAATTGAGCCTGTGACTGAGCAACAAATAATGGGCATATATGGATTACAACAATCTACACAACAAGGAGAAGATGCTCTCTCTCAAGGACTTGAAGCTCTTAATCAATCTCTTTCAGAAACTATAACATCAGAATCATTGAGTTACCCTCCCAACATGAATAATTACATGGATCAAATGTCTAGGGCCATGAACAAACTCTCCACCCTTGAAAGTTTCGTAAGAGAGGCGGATAATCTACGACACCAAACCATTCACCGTTTGAATCAGATCCTAACAACTCGTCAAGCAGCGAGGTGTTTTCTTGCCATGGCCGAGTACTTCCATCGCTTGCGAACCTTGAGTTCTCTGTGGTTGGCACGCCCTCGTCAAGAATAG 1473 0.4005 MAASSVKNLNQTTTQLEPLPPQHHQNHHFHHQQHQQQQQQHHQNNQISFGMMQSSSSLSVPGSSYINNKDSGAYDLGELDQALFLYLNGQTDPTSVHEQKQNSSSSGMRPPTLNIFPSQPMYVEPSSSNSKASMELISSETSGSKRGSEAPSMELTNSRKEIASGSQQPKPVKQRERNNHGKGPTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELQRARNQGMFFGGGAILGGEQGLPISMNGISSEAAMFDVEYARWLEEHHRLVCELRAAIQEHIHENDLRIFVDKFLQQIDQVLHLKSLVAKSDIFHLVSGMWVTPAERCFMWIGGFKPSELIKIIVSQIEPVTEQQIMGIYGLQQSTQQGEDALSQGLEALNQSLSETITSESLSYPPNMNNYMDQMSRAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRLRTLSSLWLARPRQE* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1575 490 CDD bZIP_HBP1b-like 199 251 - -
Tpr6g1575 490 Pfam Seed dormancy control 290 365 IPR025422 GO:0006351|GO:0043565
Tpr6g1575 490 MobiDBLite consensus disorder prediction 22 44 - -
Tpr6g1575 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Tpr6g1575 490 MobiDBLite consensus disorder prediction 122 201 - -
Tpr6g1575 490 MobiDBLite consensus disorder prediction 122 172 - -
Tpr6g1575 490 Coils Coil 218 245 - -
Tpr6g1575 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 241 IPR004827 GO:0003700|GO:0006355
Tpr6g1575 490 PANTHER TRANSCRIPTION FACTOR TGA9 83 489 - -
Tpr6g1575 490 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 83 489 - -
Tpr6g1575 490 SMART brlzneu 195 281 IPR004827 GO:0003700|GO:0006355
Tpr6g1575 490 SUPERFAMILY Leucine zipper domain 200 243 IPR046347 GO:0003700|GO:0006355
Tpr6g1575 490 ProSiteProfiles DOG1 domain profile. 272 486 IPR025422 GO:0006351|GO:0043565
Tpr6g1575 490 Pfam bZIP transcription factor 199 235 IPR004827 GO:0003700|GO:0006355
Tpr6g1575 490 Gene3D - 198 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1575 Tpr-Chr6 17001783 17009436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1575 30 490 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 56.341 3.70e-176 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g1575 DOG1 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1575 K14431 - gmx:100815176 697.967