Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1561 ATGGCTGATTATCAAGGTTACATCTTATATTTCATCATATGGCTAATATCAACAATTTTAGTAAAAACCATACTCACAAGAAAATACAAGAAATCTAATTTACCTCCAAGTCCATTTTCCTTACCAATCATAGGACACCTTCATCTTCTTGGTTCAATACCACACCAAGGACTTCACAAACTCTCAACAAAATATGGACCAATAATCCATCTTTTCCTTGGTTCTGTTCCTTGTGTTGTAGCTTCAACACCAGAATCAGCTAAAGAGTTTCTTAAGACACACGAAACCTATTTTTCGAACCGACCTCATAGTTCAGCTGTTGATTATCTAACATATGGTTCACAAGATTTTTCTTTTGCTCCTTATGGACCATATTGGAAATTCATCAAGAAAATATGTATGTCTGAGCTTCTTGGTGGTGGCACATTGACTCAACTTTTTCCTGTGAGGAAAGAAGAGACTATAAAGTTTGTTAGATTTTTGCTCAAGAAAGGGAAGGAAAATGAGGTTGTTGATGTTGCAAAAGAGCTTTTGAGGTTGTCGAATAACGTTGTGTCGAGGATGATTATGAGTCAAAGTTGTAGTGAAAATGATGGTGAGGCTGATGAGGTTAGGAAGTTGGTGCAAGATACTGCTCATCTTACTGGGAAGTTTAATGTTTCTGATTTTATTTGGATTTTTAAGAACTGGGATGTTCAAGGGTTTAGTAAAAGTTTAAAGGGAATTAGGGATAGGTTTGATTCTATGATGGAGAGGATTATCAAGGAGCATCAAGAAGTAAGGAGAAGGAGAAAGGAAGTTGGTGGAGGAGATGGTCAAATTAAGGATCTCCTTGATATTTTATTGGATATTCTTGAAAATGAGAGTTCTGAAATCAAATTGAAAATGGAGAACATAAAAGCCTTTATCTTGGACATATTTATTGCTGGAACAGACACTTCAGCCCTAACAATTGAATGGGCTTTGGCAGAGCTAATTAACAATCCACATATAATGGACAAAGCAAGACAAGAGATTAATGATGTAGTTGGAAACAATAGAATTGTAGAAGAACAAGACATTGTTAACCTTCCTTACCTACAAGCAATAGTCAAAGAAACACTAAGGATTCATCCTACAGGTCCATTAATTGTTAGAGAATCATCTGAAAAATGCACAATCCAAGGCTATGAGATTCCAGCTAAGACACAATTATTTATCAATATATGGTCTATTGGAAGAGACCCTAATTATTGGGATAATCCACTTGAGTTTAAGCCAGAGAGGTTTACTAGTGAAGTTGGAAATTTAGATGTTAGGGGACAACATTTTCATTTGATTCCATTTGGAAGTGGAAGAAGAGGATGTCCTGGAACATCATTGGCTTTGCATGTTGTGCAAACAAATCTTGCTGCTATGATTCAATGTTTTGAATGGAAGGTTAATGGGAGTGTTGATATGGAAGAGAAACCTGGTTTGACTCTTTCAAGGGCACATCCTTTAATTTGTGTTCCTGTTCCTAGGCTTAATCCTTTTCCTTCCATGTGA 1527 0.3615 MADYQGYILYFIIWLISTILVKTILTRKYKKSNLPPSPFSLPIIGHLHLLGSIPHQGLHKLSTKYGPIIHLFLGSVPCVVASTPESAKEFLKTHETYFSNRPHSSAVDYLTYGSQDFSFAPYGPYWKFIKKICMSELLGGGTLTQLFPVRKEETIKFVRFLLKKGKENEVVDVAKELLRLSNNVVSRMIMSQSCSENDGEADEVRKLVQDTAHLTGKFNVSDFIWIFKNWDVQGFSKSLKGIRDRFDSMMERIIKEHQEVRRRRKEVGGGDGQIKDLLDILLDILENESSEIKLKMENIKAFILDIFIAGTDTSALTIEWALAELINNPHIMDKARQEINDVVGNNRIVEEQDIVNLPYLQAIVKETLRIHPTGPLIVRESSEKCTIQGYEIPAKTQLFINIWSIGRDPNYWDNPLEFKPERFTSEVGNLDVRGQHFHLIPFGSGRRGCPGTSLALHVVQTNLAAMIQCFEWKVNGSVDMEEKPGLTLSRAHPLICVPVPRLNPFPSM* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1561 508 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 506 - -
Tpr6g1561 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Tpr6g1561 508 Pfam Cytochrome P450 35 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 Coils Coil 332 352 - -
Tpr6g1561 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 506 - -
Tpr6g1561 508 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1561 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1561 Tpr-Chr6 16907954 16910371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1561 1 501 Cytochrome P450 AT5G06900 49.503 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1561 K24188 - gmx:100779342 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1561 6 16907954 16910371 Tpr6g1561 6 16907954 16910371 ECH