Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1560 ATGTCTTTTGATGCTGCTTTTAGTGTTCACTTCTACATATTCTCCTTTCTAGCTTTACTAATTTTCACTTTAATTATCAAAAACAAACAAACCACAAATTGCACCTCCAAATTTAGACCCCCACCAACCCCAAGATCATTACCAATCATAGGCCACCTTCACCTTATAGGCTCAATCATACCAAAATCATTCCAAAAAATTTCTAACCAATATGGTCCACTAATTCAACTCAATCTAGGTGCCTCAACTTCAATAATTGTCTCCAATGCACAAGTAGCCAAAGAAGTCATGAAAACACATGACCTTAATTTTTGTTACCGACCCCAATTTGGTTCCTCTAATGATTTTTTATATAAAGGGTCTTATTTCATTACTGCCCCATATGGTCCTTATTGGAGATTCATGAAAAAATTATGTGTTACTAAATTACTCTCTAGCTCACAACTTAGTCGTTTCATGCATATTAGAGAACAAGAGTTAGAGAATCTCTTGAAATATCTTGTGATTTTTTCTAATGAAAATAAGTCAACGGATTTGTGTTTGGATTTGACTACTTATACTAATAATATTTTGTGTCTTATGACTATGGGAACAACTATATTTGACAAAGATATTATTAGATGTTTGGTTAGGGAGTTTATGCATGTAGGAGCTAAATTGAGTATGGGTGAAGTGTTTGGGCCTTTGGGAAAATTGGACTTGTTTGGTTATGGAAAAAAGCTTAGGAAAATAGTTGGTGAATTTGACAAAATTTTGGAAAGTTTTTTGAAGGAACATGAAGAGAGAATAAATAATGAGGATCGTGAAGGAGACATGATGGATATCTTATTAGAAGTTTATAGAAATCCAAATGCTGAAGTTAGGTTAACAAGAAATGATATCAAGGCCTTTTTTCTAGACATTTTACTTGCCGGAACAGACACATCCTCAGTGGCAATGCAATGGGCTATGGCAGAGATTATAAACAACCCAATAATATTAAATAAGTTAAGGGCTGAGATTGAATCTGTAGTTGGACCAACTAGATTAATTAGAGAATCAGACGTTCCAAAAATGCCTTACTTACAAGCTTGTGTAAAAGAAGTGTTAAGACTCCATCCACCTGCACCCTTTGCTCTTAGACAATCATCAGATCAAGATTGCAAAATCAACGGCTACGATGTAAAGGCTCATACAAGGACACTAATCAATGTGTATGCAATCATGAGGGACCCAAAATCATGGGTCAACCCTGAGGAGTATATACCTGAGAGATTTTTAGTAAGTGGTGATGAGATCAACGGTGGAGATGATTATGAAGATGTGAATAAAATGGACGGTGGTGATGATTTTAGGTATATTCCATTTGGGTTTGGTAGGAGGGGTTGTCCTGGTTCATCACTTGCATTAAGGGTTATACATGTGACAATTGGTGCGTTGATTCAATGTTTTGAGTGGAAAATTAACGGTGGTGATAAGGTTAATATGGAAGAAGGGTCATCATTTTCTGTAGGATTGGCTAAACCGTTAGTTTGTTACCCTGTTACTTGTTTTAATCCTTTTGAAAATTGTTTGTGA 1557 0.3539 MSFDAAFSVHFYIFSFLALLIFTLIIKNKQTTNCTSKFRPPPTPRSLPIIGHLHLIGSIIPKSFQKISNQYGPLIQLNLGASTSIIVSNAQVAKEVMKTHDLNFCYRPQFGSSNDFLYKGSYFITAPYGPYWRFMKKLCVTKLLSSSQLSRFMHIREQELENLLKYLVIFSNENKSTDLCLDLTTYTNNILCLMTMGTTIFDKDIIRCLVREFMHVGAKLSMGEVFGPLGKLDLFGYGKKLRKIVGEFDKILESFLKEHEERINNEDREGDMMDILLEVYRNPNAEVRLTRNDIKAFFLDILLAGTDTSSVAMQWAMAEIINNPIILNKLRAEIESVVGPTRLIRESDVPKMPYLQACVKEVLRLHPPAPFALRQSSDQDCKINGYDVKAHTRTLINVYAIMRDPKSWVNPEEYIPERFLVSGDEINGGDDYEDVNKMDGGDDFRYIPFGFGRRGCPGSSLALRVIHVTIGALIQCFEWKINGGDKVNMEEGSSFSVGLAKPLVCYPVTCFNPFENCL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1560 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tpr6g1560 518 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 515 - -
Tpr6g1560 518 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 Pfam Cytochrome P450 41 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g1560 518 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 7 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1560 Tpr-Chr6 16901423 16904451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1560 14 514 Cytochrome P450 AT2G42250 47.233 5.20e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1560 - - cam:101497927 752.281