Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1531 ATGTTTCATAATAATAATAATGTTGATGAATTTGATCAAGATCCTATGTCTTGGTCAATGCAACTGGAAAATCATTTTTGTGGTGAATTTTCTATGGCTTCCATTCAATCTAACCTAAAAATGGAAGATAAAAGTCAAGTGGAGGTGTGCAACTATGCAACTTTTGTTGGCATATACGATGGAAACAAAGGAGATTCTGCTGCTAGGTATCTCAACAATTACATCTTCAAGGATCTACTGGACCGTATTAAGAAGTATCTGAAGAGATTTAATATGACCAAGGATGCTGCAAAAACAATTATGTTAGAAACCTTTTCTGAAATGGAGAAAGAATTCACCAAGGCTGCTGACTTTGGTTATTGGGGTTGGAGAAACCCATATATGAGCGTTGTAAGCTCCGGTTGTTTGATTTGTTTGATTTGGGGACGGGAGTTGTATCTTGCCAATCTAGGAGACTCGCGAGCTATACTATGTTCTAACCAGCCTGGTTCAGAATTGCTTGTTCATCCAATGCTGAGAGATCACAATTGCAGAAATGTAGAGATTCGGCAAGAACTCGAATCATTACACGGGCACGACGATACCATTTGCTCCAATGTCTTTGGGGAATGGCGTGTCAAAGGCTTAAGCGAGACAAGTAGATGTATAGGCAATGCATATTTGAAAAAAGCTGAATTTACTACAGAGAGTGGTTTTAAAGCCGCACCAGGAGAAGAGGTTACGTCAATATTCACGGAACCAGTTCTATCAGCAGAACCAGAGTTGTATACAAGAGATTTAGATGGTACTGAAAAGTTCATTATATTTGGATCTGGTGGATTTTGGAAATTATTAACAAATGAGGAGGCTGCTAAAATCTTTAATGACCATCCGCGAGAAGGAATCGCAAAGAGGCTAGCAGCTCAGGCTGTAAAAGTTGCAGCTGAAAGATGGGGCCTAGCCTATAGGGAAGTGATGCTTGCCCCTAAGGGAGTGAAAATAAGCGGAAAACCTTGTACTTCGTCCGAACTAATTAAGCCGCTTTATCATGATGATATAACTGTAATTGTTGTATATTTGGACTTAAATCTTCCTGTGACAGTAGACAGCGAGACTTACAACAGTTACAGAAGCCACTCGGATAGTGTTCTACCATCGGGTTTTGGCTATGATGTGAAAGTTGATGAGCACTGGGATTATGGGAAGATTGGTGATGAGTATGGTGAAACATAG 1212 0.3993 MFHNNNNVDEFDQDPMSWSMQLENHFCGEFSMASIQSNLKMEDKSQVEVCNYATFVGIYDGNKGDSAARYLNNYIFKDLLDRIKKYLKRFNMTKDAAKTIMLETFSEMEKEFTKAADFGYWGWRNPYMSVVSSGCLICLIWGRELYLANLGDSRAILCSNQPGSELLVHPMLRDHNCRNVEIRQELESLHGHDDTICSNVFGEWRVKGLSETSRCIGNAYLKKAEFTTESGFKAAPGEEVTSIFTEPVLSAEPELYTRDLDGTEKFIIFGSGGFWKLLTNEEAAKIFNDHPREGIAKRLAAQAVKVAAERWGLAYREVMLAPKGVKISGKPCTSSELIKPLYHDDITVIVVYLDLNLPVTVDSETYNSYRSHSDSVLPSGFGYDVKVDEHWDYGKIGDEYGET* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1531 403 Gene3D - 7 357 IPR036457 -
Tpr6g1531 403 Pfam Protein phosphatase 2C 53 304 IPR001932 -
Tpr6g1531 403 ProSiteProfiles PPM-type phosphatase domain profile. 29 353 IPR001932 -
Tpr6g1531 403 SMART PP2C_4 23 351 IPR001932 -
Tpr6g1531 403 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 8 357 - -
Tpr6g1531 403 CDD PP2Cc 30 353 IPR001932 -
Tpr6g1531 403 PANTHER ALPHABET, ISOFORM E-RELATED 8 357 - -
Tpr6g1531 403 SUPERFAMILY PP2C-like 12 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1531 Tpr-Chr6 16602239 16603880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1531 18 381 PP2C-type Phosphatase Gene Family AT5G06750 38.108 1.43e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1531 K01102 - qsu:112015501 246.514