Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1524 ATGGATATGCTTCAAAAGGAGTGTCTCCTTAGGTTAGGATTGTTGCTATGTGTTTCATTTGGCTTCTTGCTACATCCTGTTGTAACAGCTGTAATACCATTAGGTTCGAAACTTTCTGTGGTTGATAATGATTGTTGGGTTTCCTCTAATGGCGATTTTGCATTCGGGTTCTTTAACATTACTGATGAACCTAACCAGTTTAGTGTTGGTATTCGTTTCAATTCGAAGTCTATTCCTTATAGTCAACAAACACTTGTATGGATTGCTGGTGCTCATGTCAAAGTAAGCAACATGTCCTATTTCCAACTCACTCCACAAGGGGAACTTGTCTTGTTTGATTATTTACATGGAGTCACTGGGTGGAGCAGTCAAACAGGAAACCAATCTGTTGCTTCGGCTGCGCTTCATGACAATGGAAATCTTGTTCTGATGGACGCAAAACAAAACGTTATTTGGCAAAGTTTTGATACTCCTTCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTTACGAGACGCTTCGTGCTTCAACCAAGGACCCTCAGAATAGTTACTACAGTCTTTACTTGAATGCTTCTGGTCGGTTACAGCTTCGTTGGGAGAGTAGTGTTGTATACTGGACTAGTGAAAGCCCTTCTGCTGCAAATCTCACTGCATTCCTTACAACCGATGGATCTCTTCAACTTCGTGACCAAAAATTTAAAACTGTTTGGAGTGTATTTGGAGAAGACCACAATGATTCTGTGAGTTATCGATTTCTTAGGCTAGATTTGGATGGAAATCTCAGGTTATACTCATGGACAGAAGCTTCACAATCATGGAGATCTGTTTGGCAAGCTGTTGAGAATCAATGCAAAGTCTTTGATACTTGTGGCAAACGCGGCGTCTGTGTCTTCAATGCTTCAGGTTCTGCCGAGTGCAGGTGTCCTTTCAAGGTAACCGATACTAACATTTGTTTGGTTCCATATGAACAGGACTGTGCTTCTGGCATCAATATGCAACAATATAAGAACATATATCTATATGGAATTTACCCTCCTGATGATTCTGTCATCACAAGTAGTTTGCAGCAATGTGAACAGTTGTGCCTGAATGACCCTCGGTGTACGGTTGCGACCTTTTCCAATATTGGTAGACCACAATGCTCCATAAAGAAAACTAATTACATAACTGGCTATGAAGATCCGTCTCTAAGCTCAATATCATTTGTTAAGAGGTGCTCAGGTCCATTGGCTGTAGATCCTGGTCTCAAGAAGTCGCCTCCACCAAAACCGTCTCCTCGGAGGCTTTGCGTTCGTTGCATTGTAGGGGCAGCCTCAGGAACATTTTTGTTCTTTGCTTTTGTTCAGCTGGGAATTGTTTTCTTCATCTGTAGAAGAAAAAGCTCTACTATGAGAAGAGTTACATTAGCATTCACATTCCCGAATTCAAAAGGCTTAATGGTGTTATCCTTTGCAGAAATCAAAAGCATCACCGGAGATTTCAAGAATCGAATAGGGCCAAATATGTTCAAGGGTGTGCTACCGAGCAATTGTCTGGTTGCAATCAAAGACCTGAATGCATCCATAGAAGAAAGGAAATTCCGGAGTGCTGTTATGAAGATAGGGACCATCCACCACAAGAACCTAGTGGAGCTGGAGGGCTATTGTTGTGAGTTCAATAATCGATATTTGGTGTATGAATATGCCAAAGCCGGTTCATTGGACAAGTATTTAGATGACCCTACTCTTTGCAAGAGGCTAACTTGGAGAAACAGAATTGAAATATGCTCGAGTGTGGCAAAGGCCATCTGTTATTTGCATTCAGGGTGCAGGGAATTTATAAGCCACGGAAATTTGAAATGTGAGAATGTGATGTTGGATGAAGATTCAGTTGCTAAGGTATCTGAATATGGATTTGCAATAATCAATGGAGAGGCTACATACTGCGGCTTTTCAGCTGAAAAAGATGTAGGAGATTTTGGCAAATTAGTATTAACCCTGTTAACCGGGCAGCGAGATCACGAACAAGTTTGTGAATGGGCTTACGAAGAATGGATGGAAGGAAGGGTTGATAACGTGGTTGATAAGAGAATCGAAGGTGGTGCTAATTCAGAAGAACTCGAACGCGCGTTAAGAATTGCATTCTGGTGCGTTCAAATGGATGAACATAAAAGACCACCGATGGAAGAGGTAGCGAGAGTACTAGATGGTACATTGAATGTTGATCCACCACCATCTCCATTTCAGCTGCCTTGTAATCCACAAGAAAATGGTTCAGAATCAGAATTAGAATCAGTGGTTTAG 2286 0.4151 MDMLQKECLLRLGLLLCVSFGFLLHPVVTAVIPLGSKLSVVDNDCWVSSNGDFAFGFFNITDEPNQFSVGIRFNSKSIPYSQQTLVWIAGAHVKVSNMSYFQLTPQGELVLFDYLHGVTGWSSQTGNQSVASAALHDNGNLVLMDAKQNVIWQSFDTPSDTLLPGQSLSVYETLRASTKDPQNSYYSLYLNASGRLQLRWESSVVYWTSESPSAANLTAFLTTDGSLQLRDQKFKTVWSVFGEDHNDSVSYRFLRLDLDGNLRLYSWTEASQSWRSVWQAVENQCKVFDTCGKRGVCVFNASGSAECRCPFKVTDTNICLVPYEQDCASGINMQQYKNIYLYGIYPPDDSVITSSLQQCEQLCLNDPRCTVATFSNIGRPQCSIKKTNYITGYEDPSLSSISFVKRCSGPLAVDPGLKKSPPPKPSPRRLCVRCIVGAASGTFLFFAFVQLGIVFFICRRKSSTMRRVTLAFTFPNSKGLMVLSFAEIKSITGDFKNRIGPNMFKGVLPSNCLVAIKDLNASIEERKFRSAVMKIGTIHHKNLVELEGYCCEFNNRYLVYEYAKAGSLDKYLDDPTLCKRLTWRNRIEICSSVAKAICYLHSGCREFISHGNLKCENVMLDEDSVAKVSEYGFAIINGEATYCGFSAEKDVGDFGKLVLTLLTGQRDHEQVCEWAYEEWMEGRVDNVVDKRIEGGANSEELERALRIAFWCVQMDEHKRPPMEEVARVLDGTLNVDPPPSPFQLPCNPQENGSESELESVV* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1524 761 CDD B_lectin 47 158 IPR001480 -
Tpr6g1524 761 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Tpr6g1524 761 SMART ntp_6 328 406 IPR003609 -
Tpr6g1524 761 ProSiteProfiles PAN/Apple domain profile. 327 407 IPR003609 -
Tpr6g1524 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 276 IPR036426 -
Tpr6g1524 761 SUPERFAMILY Protein kinase-like (PK-like) 481 729 IPR011009 -
Tpr6g1524 761 Gene3D Hepatocyte Growth Factor 334 409 - -
Tpr6g1524 761 Pfam Protein tyrosine and serine/threonine kinase 511 635 IPR001245 GO:0004672|GO:0006468
Tpr6g1524 761 Gene3D - 29 156 IPR036426 -
Tpr6g1524 761 Gene3D - 157 281 IPR036426 -
Tpr6g1524 761 Pfam S-locus glycoprotein domain 246 309 IPR000858 GO:0048544
Tpr6g1524 761 ProSiteProfiles Protein kinase domain profile. 474 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g1524 761 MobiDBLite consensus disorder prediction 742 761 - -
Tpr6g1524 761 MobiDBLite consensus disorder prediction 746 761 - -
Tpr6g1524 761 Pfam D-mannose binding lectin 84 171 IPR001480 -
Tpr6g1524 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 210 IPR036426 -
Tpr6g1524 761 Gene3D Phosphorylase Kinase; domain 1 457 562 - -
Tpr6g1524 761 Gene3D Transferase(Phosphotransferase) domain 1 564 736 - -
Tpr6g1524 761 SMART blect_4 37 158 IPR001480 -
Tpr6g1524 761 Pfam PAN domain 332 391 IPR003609 -
Tpr6g1524 761 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 10 756 - -
Tpr6g1524 761 PANTHER OS07G0415500 PROTEIN 10 756 - -
Tpr6g1524 761 PIRSF SRK 639 760 IPR024171 GO:0004674
Tpr6g1524 761 PIRSF SRK 1 644 IPR024171 GO:0004674
Tpr6g1524 761 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1524 Tpr-Chr6 16505409 16509105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1524 417 729 Receptor kinase-like Gene Family AT3G45860 28.652 5.49e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g1524 PK_Tyr_Ser-Thr 6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1524 - - gmx:100809478 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1524 6 16505409 16509105 Tpr6g1524 6 16505409 16509105 ECH