Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1505 ATGGCAGAATCATTTGTGTTTGATATCACTGATTCACTCTTAGGGAAACTTGCTTCATATGTTTATGAAGAAGCTTCTCGTGCCTATGGTGTGTCTAAAGATCTACAACGGATCAAAGATACTCTGTCAATTGTCAGAGGTTTGTTGTTGGATGCTGAGCACAAGAAGAACCAACAACATGCCTTGCGTGAATGGCTAAAGCAGATTCAAAACATCTGCTATGATGCAGAAGATGTATTGGATGAATTTGAGTTACAACACAAGAAAAAACAAGTTCTGGAAGCTTCTGGCAGCACTATGGTAAAGGTAAGTCACTTGTTTTCTTCCTCTAGTCCACTAGCTTTCCGTTTTAAGATGGCACATCAACTCAAAAAGCTCAAAAATAGATTAAATAAGGTAGCAGCTGATGGAACTGGATTTGGACTTGTGAGAATACATGATGAGCCAAGACTTGCTGTGCAAAGAAGAGAATTGACTCATTCCCATGTTGATGCTTCAAGTCTCATAGGGAGGGAGAACGAAAAGGAATCAATTATAAAGCTTTTGATGGAATCCAATCCTCGGGGTCTTGGTACGAAAAGTATGTCTGTTATTCCCATTGTGGGAATCGGAGGATTGGGGAAAACCACACTTGCAAAATTGGTATTCAACGATAAGAAGATAGATGAAGTTTTCCAATTGAAGATATGGGTGTGCGTCCCTGATGATTTTGATATTAGGAAGATAATTATCAAAATTATCAACTCAGCTTTTTCTTCAACTTCAGCTCCACCAAGTGTTGCTTTTGCTCACCAAGAAGACATTAACCACTTTGACATTGAGCAGCTACAAATTTGTCTAAGACATAAACTTTATGGTCAAAAGTTTATCCTCGTACTAGATGATATATGGAATGATGATCGTGCAAAATGGATTGAGTTGACAGATTTGATCAATGTTGGTGCAGCAGAAAGTAAAATCATAGTGACGACACGTAGCAACTCAATTGCTTCAATGATGGGCACTGTTTCCCCATATGTTTTGGAAGGTCTTTCTCTGGATAATTGTTTGTCTTTGTTTGTGAAATGGGCATTTAAGGATGGAGATGAAGAAAAATATTCAAATCTAGTTGAGATCGGAAAAGAAATTGTGAAAAAATGTGCAGGAGTTCCGTTGGCTGTCAGAACATTAGGAAGTTCTTTGTTCTCAAAATATGATTTAAATAAGTGGATATTCGTAAGAGACCATGAGATATGGAAGTTAGAACAGAAGAAAGATGACATTTTACCTGCATTAAAATTAAGTTACGATGAAATGCCATCCTATTTGAGACAATGTTTTGCTTATTTTTCCTTGTTTCCCAAAAATGATGCCATTATTGTCATAAATATTACTACTTTGTGGATAGCCCTTGGATTAGTTGAATCCACGAATGAAAGTGAAGAACTAGAGCATATTGCTAGAGAATATATACATGAGTTACATTCAAGATCCTTTCTTCAGGATTTCACGGACAAGGGGGACCTTAGCTTTTTCAAAATGCATGATTTGATACATGATCTTGCATTGTATGTTGCGAAAGAGAAGTTTGTAATTGTAGACTCAAATAATCGGAATATGTCTGAACAAGCAAGACATTTATCGATAATTGAAAATGATTCTCTTGACCGTGTTTTGTTCTCCAAGTCCAAAAGTGTAAGAACTATTTTATTTCCAGTTAAAGGGGTTGGCCTTGACAATGAATCATTGTTGGATCTATGGATATCAAGATATAAATACTTGCGATTTTTAGATTTGACTGATTCTTCATTTGACACTCTGCCTAACTCAATTGGTGAATTGAAACACCTGCGTGGTCTTGGTCTATCTAATAACAATAAACTCAAAAGACTTCCTCATTCTATTTTCAAACTCCATAATTTGCAATTCTTGTACCTCGATGGATGCACAGAGCTCGAAACTTTGCCAAGAGGATTAGGAAAGATGACTAACCTTCGACTGTTGAGTATAACAACCAAACAATCAGTTTTGACATTGACTGAATTTGTAAACTTGAACCATCTTAAGTGTTTGGTATTTCAATATTGTAAAAATATGAAGTTTGTATTCAGTGGGGAACAACAGCTCACTTCCATTGAAACACTGTGTTTGTATTCATGTGGGAGCCTAGAATCCTTACCTCTCCATATTTTTCCGAAATTACAGTCTCTAGTAATTGCAGACTGCAAGATGTTAAACTTGTCGTTGAACAACGAAAGCCCAGTCAAAAAATTGATGATGAAACATTTGTTTGTTAACGATATTCCAGGGCTTTTGACATTGCCTGGATGGATATGTGCAGCAGAAAATTTAGAGACCTTGACAATTTATGACCTTTCTAATCTTCAAACTTTTCCCGAGTGTCTGACAACAATGACTCATCTTAAAAGGCTCGTCATTAGGGGTTGTCCTCAACTATTGAGCCTTCCTAGTGGCATACATCATCTCACCGCCCTTGAAGAATTGTACATAGATGGCTGTCCTGAATTGTGCAGAAAATGTCAGCCACAATCTGGGAGCCTATATGGTTGGTAA 2553 0.3694 MAESFVFDITDSLLGKLASYVYEEASRAYGVSKDLQRIKDTLSIVRGLLLDAEHKKNQQHALREWLKQIQNICYDAEDVLDEFELQHKKKQVLEASGSTMVKVSHLFSSSSPLAFRFKMAHQLKKLKNRLNKVAADGTGFGLVRIHDEPRLAVQRRELTHSHVDASSLIGRENEKESIIKLLMESNPRGLGTKSMSVIPIVGIGGLGKTTLAKLVFNDKKIDEVFQLKIWVCVPDDFDIRKIIIKIINSAFSSTSAPPSVAFAHQEDINHFDIEQLQICLRHKLYGQKFILVLDDIWNDDRAKWIELTDLINVGAAESKIIVTTRSNSIASMMGTVSPYVLEGLSLDNCLSLFVKWAFKDGDEEKYSNLVEIGKEIVKKCAGVPLAVRTLGSSLFSKYDLNKWIFVRDHEIWKLEQKKDDILPALKLSYDEMPSYLRQCFAYFSLFPKNDAIIVINITTLWIALGLVESTNESEELEHIAREYIHELHSRSFLQDFTDKGDLSFFKMHDLIHDLALYVAKEKFVIVDSNNRNMSEQARHLSIIENDSLDRVLFSKSKSVRTILFPVKGVGLDNESLLDLWISRYKYLRFLDLTDSSFDTLPNSIGELKHLRGLGLSNNNKLKRLPHSIFKLHNLQFLYLDGCTELETLPRGLGKMTNLRLLSITTKQSVLTLTEFVNLNHLKCLVFQYCKNMKFVFSGEQQLTSIETLCLYSCGSLESLPLHIFPKLQSLVIADCKMLNLSLNNESPVKKLMMKHLFVNDIPGLLTLPGWICAAENLETLTIYDLSNLQTFPECLTTMTHLKRLVIRGCPQLLSLPSGIHHLTALEELYIDGCPELCRKCQPQSGSLYGW* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1505 850 PRINTS Disease resistance protein signature 197 212 - -
Tpr6g1505 850 PRINTS Disease resistance protein signature 283 297 - -
Tpr6g1505 850 PRINTS Disease resistance protein signature 380 394 - -
Tpr6g1505 850 PRINTS Disease resistance protein signature 605 621 - -
Tpr6g1505 850 CDD RX-CC_like 2 134 IPR038005 -
Tpr6g1505 850 Pfam NB-ARC domain 172 430 IPR002182 GO:0043531
Tpr6g1505 850 Gene3D - 344 427 IPR042197 -
Tpr6g1505 850 Gene3D - 10 130 - -
Tpr6g1505 850 Pfam Rx N-terminal domain 12 96 IPR041118 -
Tpr6g1505 850 Gene3D - 428 517 IPR036388 -
Tpr6g1505 850 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 740 - -
Tpr6g1505 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 442 IPR027417 -
Tpr6g1505 850 Gene3D - 152 338 IPR027417 -
Tpr6g1505 850 SUPERFAMILY L domain-like 506 840 - -
Tpr6g1505 850 Gene3D Ribonuclease Inhibitor 528 752 IPR032675 -
Tpr6g1505 850 Gene3D Ribonuclease Inhibitor 753 846 IPR032675 -
Tpr6g1505 850 PANTHER DISEASE RESISTANCE PROTEIN RP 6 740 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1505 Tpr-Chr6 16291019 16294602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1505 198 836 WRKY Transcription Factor Family AT5G45050 21.525 2.28e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1505 - - mtr:MTR_7g091550 1245.72