LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g1504	ATGGCTGAATCATTTGTGTTTGGTGTTGCTGATTCACTGTTAGGGAAGCTTGCATCATATGCTTATGAAGAGGCTTCTCGTGCCTATGGTGTGTATGAAGATCTCCAACGGATTAAAGATACTTTGTCAATTGTCAAAGGTCTACTGCTGGATGCTGAGGAGAAGAAGAACAAACAACATGCCTTGCGTGAATGGCTGAGGCAGATTCGTAACATATGCTCTGATGCTGAAGATGTATTGGATGGATTTGAGTTGCAAGACAAGAAAAAACAGGTTATGAAAGTTTTTGGTAGCACTTCGATGAAGGTACGCCACTTCTTTTCTTCCTCTAATCCACTTGCTTTCCGATTTAAGATGTCATGCCAAATCAAAGAGATTAAGGATAGATTGGATAAGGTAGCAGCTGATGGAACTAGGTTTGGACTCATGAGAATCGATGATGAGCCTGGACTTTCTGTGCAAAGAAGGGAATTGACTCATTCCCATGTTGATGTTTCAAGTGTAATAGGGAGGGAGAATGACAAGGAAGCAATTATCCAACTTTTGATGGAGTCTAATCCAAAGGGTCTTGGTGATAAAAGTCTATCTGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAAACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGGATAGATGAAGTCTTCCAAATGAAGATTTGGGTGTGTGTCTCCAATGATTTTGATATTAGGCACATAATTATCAAAATTATTAACTCTGCTTTTCTTTCATCTTCACCTCCACCTAGTGTTTCTATTTCTCACCAAGAAGACATTAACCACTTTGATATTGAGCAGCTACAGATTCGTCTAAGACATAAACTTTCTAGTCAAAAGTTTATCCTCGTGTTAGATGATATATGGAGTGATGATCGTGCAAAATGGATTGAGTTGTTAGATTTGCTTAAAGTTGGTGCTGCAGAAAGTAAAATCATAGTGACAACACGTAGCAACCCAATTGCTTCAATGATGGGTACTGTTCCTTCATATGTTTTGGAAGGTCTTTCGGAAGAGAACTGTCTGTCTCTATTTGTGAAATGGGCATTCAAGGACGGGGAAGAAGAAAAATATTCAAATCTGGTTGAGATCGGAAAAGAAATTGTGAAAAAATGTGCAGGTGTTCCGCTGGCTGTCAGAACTCTAGGAAGTTCCTTGTTCCCAAAATATGATTTAAATAAGTGGATATTCGTAAGAGACCATGAGATATGGAATTTGGAACAGAAGAAAGATGATATTTTACCTGCATTAAAATTAAGCTATGATCAAATGCCATCCTATTTGAGACAATGTTTTGCTTTTTTTTCTTTGTATCCAAAAGATTATATCTTTAATGTCGCTTCAATTACTACTTTGTGGATAGCCCTTGGACTAGTTCGACCCAGAAATGGAATTGAAAAGCCAGAGAATATTGCAAGAGAATGTATTGATGATTTACTTTCAAGATCGTTTCTTCAGGATTTCAATGATTATGAGTTCAATTGTGACTTCAAAGTGCATGATTTGATACATGATCTTGCATTATATGTTGCAAAAGAGGAGTTTGTAATGGTAGACTCAAATACACAGAATATATCAGACCACGCAAGACATTTATCAATTGTTGAAAATGATTCACTTGGTCATGTTATATGCCCTAACTCCAAAAGTGTAAGAACTATTCTATCTCCGGTTGAAGGTGTGGGCCTTGACAACGAAACATTGTTGCATACATGGCTATCAAGATATAAATACTTGCGGTATTTAGATTTAAGTGATTATTCATTTGAGACTCTTCCTAACTCTATTGCTAAATTGGAGCACCTGCGTGTTTTCATTCTCAATAATAATATCAAAATCAAGAGACTTCCTCATTCTATTTTCAAACTCCTTAATTTGCAAATCTTGGATCTCAGTGGATGCACAAAGCTTGAAACATTGCCAAAAGGATTAGAGAAGATGATCAGCCTTCAATATTTATCTATAACCACCAAACAATCAATTCTGTCATTGGATGAATTTGCAAACTTGAACCATCTTCAGTTTTTGGCTTTCAGTTACTGTAAAAATATGAATTTTTTTTTCAGCATGGCACATCAACTCACCTCTCTTGAAACATTGTCTTTGTATTCGTGTTGGAACCTGAAATCATTACCTCTTCATATTTTTCCAAAATTGCAGACTCTAATAATTGTAGACTGCAAGATGTTAAATATGTCGTTGAACAATGAAAACACAATTCAAAAATTGAGGTTGAAACATTTGTGTATAGGGGATTTTCCAAGGCTTTTGACATTGCCCGGATGGATTGAAGGTGCTGCAGAAACTTTAGAGACCTTGACAATTTATAAATTTCCTAATCTTAAGACGCTTCCTATGTGTCTGACAACATTGACCCGTCTTAAAAAGCTCTATATTTATGATTGTCCTCAAATATCGAGCCTTCCATGTGACATACATCATCTAACTTCCCTTGAAGATTTGGTCATAGAAGATTGTCCTGAGTTGTGCCGAAAATGTAAGCCGCAATCTGGTGAACACCAGCCTATGATTGCTAGCATAAAAAATGTTTCCATCGGAGAACCAAGAGGACAGGAGGAGGAACGAAGACATCAGACTTCAAAGGTATGA	2634	0.3694	MAESFVFGVADSLLGKLASYAYEEASRAYGVYEDLQRIKDTLSIVKGLLLDAEEKKNKQHALREWLRQIRNICSDAEDVLDGFELQDKKKQVMKVFGSTSMKVRHFFSSSNPLAFRFKMSCQIKEIKDRLDKVAADGTRFGLMRIDDEPGLSVQRRELTHSHVDVSSVIGRENDKEAIIQLLMESNPKGLGDKSLSVIPIVGIGGLGKTTLAKLVFNDKRIDEVFQMKIWVCVSNDFDIRHIIIKIINSAFLSSSPPPSVSISHQEDINHFDIEQLQIRLRHKLSSQKFILVLDDIWSDDRAKWIELLDLLKVGAAESKIIVTTRSNPIASMMGTVPSYVLEGLSEENCLSLFVKWAFKDGEEEKYSNLVEIGKEIVKKCAGVPLAVRTLGSSLFPKYDLNKWIFVRDHEIWNLEQKKDDILPALKLSYDQMPSYLRQCFAFFSLYPKDYIFNVASITTLWIALGLVRPRNGIEKPENIARECIDDLLSRSFLQDFNDYEFNCDFKVHDLIHDLALYVAKEEFVMVDSNTQNISDHARHLSIVENDSLGHVICPNSKSVRTILSPVEGVGLDNETLLHTWLSRYKYLRYLDLSDYSFETLPNSIAKLEHLRVFILNNNIKIKRLPHSIFKLLNLQILDLSGCTKLETLPKGLEKMISLQYLSITTKQSILSLDEFANLNHLQFLAFSYCKNMNFFFSMAHQLTSLETLSLYSCWNLKSLPLHIFPKLQTLIIVDCKMLNMSLNNENTIQKLRLKHLCIGDFPRLLTLPGWIEGAAETLETLTIYKFPNLKTLPMCLTTLTRLKKLYIYDCPQISSLPCDIHHLTSLEDLVIEDCPELCRKCKPQSGEHQPMIASIKNVSIGEPRGQEEERRHQTSKV*	878

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g1504	877	Gene3D	-	428	517	IPR036388	-
	Tpr6g1504	877	Gene3D	-	153	338	IPR027417	-
	Tpr6g1504	877	SUPERFAMILY	L domain-like	506	842	-	-
	Tpr6g1504	877	CDD	RX-CC_like	2	134	IPR038005	-
	Tpr6g1504	877	MobiDBLite	consensus disorder prediction	862	877	-	-
	Tpr6g1504	877	PRINTS	Disease resistance protein signature	197	212	-	-
	Tpr6g1504	877	PRINTS	Disease resistance protein signature	283	297	-	-
	Tpr6g1504	877	PRINTS	Disease resistance protein signature	380	394	-	-
	Tpr6g1504	877	PRINTS	Disease resistance protein signature	629	645	-	-
	Tpr6g1504	877	Pfam	NB-ARC domain	171	430	IPR002182	GO:0043531
	Tpr6g1504	877	Pfam	Rx N-terminal domain	11	98	IPR041118	-
	Tpr6g1504	877	Gene3D	Ribonuclease Inhibitor	566	771	IPR032675	-
	Tpr6g1504	877	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	155	442	IPR027417	-
	Tpr6g1504	877	Gene3D	-	10	124	-	-
	Tpr6g1504	877	PANTHER	DISEASE RESISTANCE PROTEIN RP	6	749	IPR044974	GO:0006952
	Tpr6g1504	877	MobiDBLite	consensus disorder prediction	857	877	-	-
	Tpr6g1504	877	Gene3D	-	343	427	IPR042197	-
	Tpr6g1504	877	Gene3D	Ribonuclease Inhibitor	772	842	IPR032675	-
	Tpr6g1504	877	PANTHER	NBS-LRR DISEASE RESISTANCE PROTEIN	6	749	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g1504	Tpr-Chr6	16284639	16287867	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g1504	195	837	WRKY Transcription Factor Family	AT5G45050	20.393	5.75e-11	64.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g1504	-		-	mtr:MTR_7g091550	1294.26